Pseudomonas capeferrum str. WCS358

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas capeferrum strain WCS358 is characterized by having a single replicon, which is a notable trait indicating its genomic structure. The strain's genetic material is recorded under the accession number JMIT00000000.1, providing a reference for researchers interested in its genomic analysis and characteristics. As a member of the Pseudomonas genus, Pseudomonas capeferrum likely exhibits traits typical of this group, such as metabolic diversity and the ability to thrive in various environments. Pseudomonas species are known for their role in biogeochemical cycles and their interactions in diverse ecological niches, which may include soil and aquatic ecosystems. The presence of a single replicon in Pseudomonas capeferrum strain WCS358 may suggest a streamlined genomic organization, potentially allowing for efficient replication and adaptation to its environmental conditions. This trait may play a role in the strain's ecological fitness, allowing it to respond effectively to changes in its habitat. In summary, Pseudomonas capeferrum strain WCS358, with its single replicon and documented genomic data, represents a distinct member of the Pseudomonas genus. Its potential ecological roles and adaptations underscore the importance of further studying such strains to understand their contributions to environmental processes and microbial diversity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas capeferrum
StrainWCS358

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas capeferrum str. WCS358
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas capeferrum strain WCS358 WCS358-Sc8, whole genome

Gene Summary

Adenine Count

1123583 bp

Thymine Count

1092830 bp

Guanine Count

1825176 bp

Cytosine Count

1895489 bp

Genome Length

5940443 bp

Protein-coding Genes

5055 genes

Non-Coding Genes

236 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
monovalent cation/h+ antiporter subunit aPC358_12760Not AvailablePositive2825914 - 2828829105029.0
monovalent cation/h+ antiporter subunit cPC358_12765Not AvailablePositive2828829 - 282917312391.5
monovalent cation/h+ antiporter subunit dPC358_12770Not AvailablePositive2829170 - 283084959366.2
monovalent cation/h+ antiporter subunit ePC358_12775Not AvailablePositive2830846 - 283133417699.3
cation:proton antiporterPC358_12780Not AvailablePositive2831331 - 283160910022.8
cation:proton antiporterPC358_12785Not AvailablePositive2831606 - 283197113252.7
hypothetical proteinPC358_12790Not AvailableNegative2831984 - 28321967886.3
hypothetical proteinPC358_12795Not AvailableNegative2832193 - 283266317200.9
hypothetical proteinPC358_12800Not AvailableNegative2833026 - 28332206884.44
conjugal transfer protein trarPC358_12805Not AvailableNegative2833403 - 283380715452.3

Displaying genes 2501 – 2510 of 5291 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.