Chryseobacterium shandongense

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Chryseobacterium

Description

Chryseobacterium shandongense is a rod-shaped bacterium characterized by a single replicon in its genomic structure. The organism has been cataloged with the accession number NZ_CP033913.1, which provides a reference for its genetic material and aids in further research and identification. As a member of the Chryseobacterium genus, C. shandongense is likely to exhibit traits commonly associated with this group, such as its environmental adaptability and potential role in biogeochemical cycles. Chryseobacterium species are often found in diverse environments, including soil and aquatic habitats, where they contribute to the decomposition of organic matter and nutrient cycling. The presence of only one replicon indicates a simpler genomic organization, which may influence its metabolic pathways and ecological interactions. Understanding the genomic and phenotypic characteristics of Chryseobacterium shandongense can provide insights into its ecological niche and functional capabilities within different ecosystems. The study of such bacteria is important for appreciating their role in environmental processes and their potential applications in biotechnology and bioremediation efforts.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium shandongense
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chryseobacterium shandongense strain H5143 plasmid unnamed,

Gene Summary

Adenine Count

21513 bp

Thymine Count

25064 bp

Guanine Count

10880 bp

Cytosine Count

12614 bp

Genome Length

70071 bp

Protein-coding Genes

56 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uvrd-helicase domain-containing proteinEG353_RS20665Not AvailableNegative30161 - 3208073842.3
atp-dependent nucleaseEG353_RS20670Not AvailableNegative32073 - 3395070649.3
hypothetical proteinEG353_RS20675Not AvailableNegative35077 - 3561020693.3
is3 family transposaseEG353_RS20680Not AvailableNegative35982 - 3705738744.9
lytic transglycosylase domain-containing proteinEG353_RS20685Not AvailablePositive37274 - 3816434485.6
hypothetical proteinEG353_RS20690Not AvailableNegative39743 - 4120953595.9
conjugal transfer protein traoEG353_RS20695Not AvailableNegative41221 - 4179321274.3
duf4138 domain-containing proteinEG353_RS20700Not AvailableNegative41806 - 4248325588.1
conjugative transposon protein tramEG353_RS20705Not AvailableNegative42491 - 4356738993.3
hypothetical proteinEG353_RS20710Not AvailableNegative43557 - 4424026056.3

Displaying genes 21 – 30 of 56 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.