Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Litoreibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Litoreibacter |
| Species | Litoreibacter ascidiaceicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
783453 bp
Thymine Count
786783 bp
Guanine Count
1096095 bp
Cytosine Count
1077544 bp
Genome Length
3743875 bp
Protein-coding Genes
3652 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted arabinose efflux permease, mfs family | SAMN05444273_10153 | Not Available | Positive | 59698 - 60930 | 42639.2 |
| squalene/phytoene synthase | SAMN05444273_10154 | Not Available | Negative | 60927 - 61679 | 27378.0 |
| 2-isopropylmalate synthase | SAMN05444273_10155 | Not Available | Negative | 61669 - 63288 | 58484.6 |
| cysteinyl-trna synthetase | SAMN05444273_10156 | Not Available | Negative | 63285 - 64691 | 52796.5 |
| arginine:pyruvate transaminase | SAMN05444273_10157 | Not Available | Positive | 64938 - 66110 | 41561.3 |
| 2-methylisocitrate lyase, pep mutase family | SAMN05444273_10158 | Not Available | Positive | 66107 - 66901 | 27786.9 |
| uncharacterized protein | SAMN05444273_10159 | Not Available | Positive | 66944 - 68095 | 41370.0 |
| trimethylamine---corrinoid protein co-methyltransferase | SAMN05444273_10160 | Not Available | Positive | 68194 - 69879 | 59974.1 |
| hypothetical protein | SAMN05444273_10161 | Not Available | Positive | 69971 - 70966 | 35732.9 |
| putative sos response-associated peptidase yedk | SAMN05444273_10162 | Not Available | Negative | 71047 - 71709 | 25077.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
