Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Litoreibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Litoreibacter |
| Species | Litoreibacter ascidiaceicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
783453 bp
Thymine Count
786783 bp
Guanine Count
1096095 bp
Cytosine Count
1077544 bp
Genome Length
3743875 bp
Protein-coding Genes
3652 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative spermidine/putrescine transport system substrate-binding protein | SAMN05444273_10263 | Not Available | Positive | 705283 - 706389 | 40454.3 |
| putative spermidine/putrescine transport system permease protein | SAMN05444273_10264 | Not Available | Positive | 706469 - 707983 | 55811.0 |
| putative spermidine/putrescine transport system permease protein | SAMN05444273_10265 | Not Available | Positive | 707987 - 708883 | 32628.5 |
| predicted aconitase subunit 1 | SAMN05444273_10266 | Not Available | Positive | 708908 - 710608 | 60407.5 |
| autotransporter secretion outer membrane protein tama | SAMN05444273_10267 | Not Available | Positive | 710896 - 712695 | 64121.0 |
| autotransporter secretion inner membrane protein tamb | SAMN05444273_10268 | Not Available | Positive | 712695 - 716429 | 128936.0 |
| 5-deoxyglucuronate isomerase | SAMN05444273_10269 | Not Available | Positive | 716559 - 717365 | 29911.3 |
| signal transduction histidine kinase | SAMN05444273_10270 | Not Available | Negative | 717382 - 719595 | 83256.5 |
| uncharacterized conserved protein, contains fist_n domain | SAMN05444273_10271 | Not Available | Negative | 719602 - 720789 | 42659.9 |
| two component transcriptional regulator, luxr family | SAMN05444273_10272 | Not Available | Negative | 720826 - 721527 | 25126.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
