Litoreibacter ascidiaceicola

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Litoreibacter

Description

Litoreibacter ascidiaceicola is a Gram-negative bacterium notable for its unique ecological niche. This organism has been characterized with a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in specific environments. The genome of Litoreibacter ascidiaceicola has been sequenced and is accessible through the accession number FQUV00000000.1, which serves as a valuable resource for researchers interested in studying its genetics and functional capabilities. Gram-negative bacteria, such as Litoreibacter ascidiaceicola, typically possess an outer membrane that can influence their interactions with the surrounding environment, including host organisms and other microorganisms. This trait may play a role in its ecological relationships, particularly in marine settings where it is commonly found. The presence of Litoreibacter ascidiaceicola in marine ecosystems suggests it may have specific ecological functions, such as participating in nutrient cycling or symbiotic relationships with marine invertebrates. Its classification as a member of the Litoreibacter genus positions it within a group of bacteria known for their diverse metabolic capabilities and ecological roles. Overall, the study of Litoreibacter ascidiaceicola not only enhances our understanding of Gram-negative marine bacteria but also provides insights into the complex dynamics of marine ecosystems, where microbial interactions are crucial for maintaining ecological balance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusLitoreibacter
SpeciesLitoreibacter ascidiaceicola
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Litoreibacter ascidiaceicola strain DSM 100566 genome assembly,

Gene Summary

Adenine Count

783453 bp

Thymine Count

786783 bp

Guanine Count

1096095 bp

Cytosine Count

1077544 bp

Genome Length

3743875 bp

Protein-coding Genes

3652 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methyltransferase domain-containing proteinSAMN05444273_11041Not AvailableNegative3397952 - 339882732043.2
hypothetical proteinSAMN05444273_11042Not AvailableNegative3398840 - 340041457381.6
polysaccharide deacetylaseSAMN05444273_11043Not AvailableNegative3400526 - 340150636545.1
glycosyltransferase involved in cell wall bisynthesisSAMN05444273_11044Not AvailableNegative3401503 - 340271143949.5
udp-galactose 4-epimeraseSAMN05444273_11045Not AvailableNegative3402724 - 340373436049.5
cobq/cobb/mind/para nucleotide binding domain-containing proteinSAMN05444273_11046Not AvailableNegative3403887 - 340472930915.3
polysaccharide chain length determinant protein, pep-cterm locus subfamilySAMN05444273_11047Not AvailableNegative3404755 - 340629956662.0
type ii secretion system protein aSAMN05444273_11048Not AvailableNegative3406296 - 340718632714.3
sugar transferase involved in lps biosynthesis (colanic, teichoic acid)SAMN05444273_11049Not AvailablePositive3407604 - 340834428452.7
tetratricopeptide repeat-containing proteinSAMN05444273_11050Not AvailablePositive3408456 - 341091889218.1

Displaying genes 3381 – 3390 of 3716 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.