Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Litoreibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Litoreibacter |
| Species | Litoreibacter ascidiaceicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
783453 bp
Thymine Count
786783 bp
Guanine Count
1096095 bp
Cytosine Count
1077544 bp
Genome Length
3743875 bp
Protein-coding Genes
3652 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c556 | SAMN05444273_10964 | Not Available | Negative | 3294715 - 3295281 | 19745.0 |
| cytochrome c553 | SAMN05444273_10965 | Not Available | Negative | 3295300 - 3295656 | 12551.9 |
| l,d-transpeptidase catalytic domain | SAMN05444273_10966 | Not Available | Negative | 3295755 - 3296324 | 21126.2 |
| signal transduction histidine kinase | SAMN05444273_10967 | Not Available | Negative | 3296489 - 3297928 | 52172.8 |
| two-component system, ompr family, response regulator | SAMN05444273_10968 | Not Available | Negative | 3297940 - 3298722 | 28929.9 |
| uncharacterized conserved protein | SAMN05444273_10969 | Not Available | Positive | 3298797 - 3299246 | 15985.3 |
| hypothetical protein | SAMN05444273_10970 | Not Available | Positive | 3299263 - 3299898 | 23197.6 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05444273_10971 | Not Available | Negative | 3299906 - 3300391 | 17602.3 |
| hypothetical protein | SAMN05444273_10972 | Not Available | Positive | 3300558 - 3301085 | 18595.4 |
| l,d-transpeptidase catalytic domain | SAMN05444273_10973 | Not Available | Negative | 3301571 - 3302236 | 24347.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
