Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Litoreibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Litoreibacter |
| Species | Litoreibacter ascidiaceicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
783453 bp
Thymine Count
786783 bp
Guanine Count
1096095 bp
Cytosine Count
1077544 bp
Genome Length
3743875 bp
Protein-coding Genes
3652 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5/6) | SAMN05444273_101287 | Not Available | Positive | 305831 - 307000 | 41667.1 |
| thymidylate kinase | SAMN05444273_101288 | Not Available | Positive | 306997 - 307626 | 22748.9 |
| dna polymerase iii, delta prime subunit | SAMN05444273_101289 | Not Available | Positive | 307623 - 308747 | 39912.9 |
| tatd dnase family protein | SAMN05444273_101290 | Not Available | Positive | 308759 - 309544 | 28952.3 |
| phosphoribosyl 1,2-cyclic phosphate phosphodiesterase | SAMN05444273_101291 | Not Available | Positive | 309541 - 310335 | 29087.8 |
| hypothetical protein | SAMN05444273_101292 | Not Available | Positive | 310336 - 311265 | 32464.6 |
| hint domain-containing protein | SAMN05444273_101293 | Not Available | Negative | 311231 - 311839 | 22327.8 |
| autotransporter beta-domain-containing protein | SAMN05444273_101294 | Not Available | Positive | 312120 - 313097 | 33982.0 |
| Trna-leu | Not Available | Not Available | Positive | 313170 - 313256 | Not Available |
| putative peptidoglycan binding domain-containing protein | SAMN05444273_101296 | Not Available | Negative | 313387 - 314751 | 47079.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
