Lacinutrix venerupis str. DSM 28755

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Lacinutrix

Description

Lacinutrix venerupis str. DSM 28755 is a bacterial strain characterized by its single replicon structure, indicating a streamlined genomic organization. This trait may contribute to the efficiency of its cellular processes, potentially enhancing its adaptability to various environments. The strain is cataloged under the accession number RCCH00000000.1, which provides a unique identifier for its genomic data within biological databases. While specific ecological roles or metabolic capabilities of Lacinutrix venerupis str. DSM 28755 are not detailed, the streamlined genome suggests a potential for niche specialization, allowing it to thrive in specific habitats. This adaptability could be an advantage in environments with fluctuating conditions, where organisms with fewer genomic complexities may respond more rapidly to changes. Understanding the genomic structure of Lacinutrix venerupis str. DSM 28755 may provide insights into its ecological interactions and evolutionary strategies. The existence of a single replicon might imply a focus on particular metabolic pathways that are advantageous for survival in its native habitat. Further research into this strain could shed light on its ecological significance and potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusLacinutrix
SpeciesLacinutrix venerupis
StrainDSM 28755

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lacinutrix venerupis strain DSM 28755 Ga0181026_119, whole genome

Gene Summary

Adenine Count

1080693 bp

Thymine Count

1091741 bp

Guanine Count

468003 bp

Cytosine Count

482828 bp

Genome Length

3123464 bp

Protein-coding Genes

2804 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aminopeptidase nCLV86_0533Not AvailableNegative555043 - 55716382120.7
atp-dependent dna helicase recgCLV86_0534Not AvailablePositive557254 - 55935680267.3
pp_00527CLV86_0535Not AvailablePositive559387 - 559974Not Available
complex i intermediate-associated protein 30 (cia30)CLV86_0536Not AvailablePositive560058 - 56058819713.7
fad-nad(p)-binding proteinCLV86_0537Not AvailablePositive560621 - 56236965141.4
peroxiredoxinCLV86_0538Not AvailableNegative562431 - 56364245865.4
hypothetical proteinCLV86_0539Not AvailableNegative563761 - 56404510873.8
phenylalanyl-trna synthetase beta subunitCLV86_0540Not AvailablePositive564233 - 56665990348.5
pap2 superfamily proteinCLV86_0541Not AvailablePositive566672 - 56752331269.7
putative surface protein with fasciclin (fas1) repeatsCLV86_0542Not AvailableNegative567531 - 56810021310.3

Displaying genes 551 – 560 of 2862 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.