Lacinutrix venerupis str. DSM 28755

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Lacinutrix

Description

Lacinutrix venerupis str. DSM 28755 is a bacterial strain characterized by its single replicon structure, indicating a streamlined genomic organization. This trait may contribute to the efficiency of its cellular processes, potentially enhancing its adaptability to various environments. The strain is cataloged under the accession number RCCH00000000.1, which provides a unique identifier for its genomic data within biological databases. While specific ecological roles or metabolic capabilities of Lacinutrix venerupis str. DSM 28755 are not detailed, the streamlined genome suggests a potential for niche specialization, allowing it to thrive in specific habitats. This adaptability could be an advantage in environments with fluctuating conditions, where organisms with fewer genomic complexities may respond more rapidly to changes. Understanding the genomic structure of Lacinutrix venerupis str. DSM 28755 may provide insights into its ecological interactions and evolutionary strategies. The existence of a single replicon might imply a focus on particular metabolic pathways that are advantageous for survival in its native habitat. Further research into this strain could shed light on its ecological significance and potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusLacinutrix
SpeciesLacinutrix venerupis
StrainDSM 28755

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lacinutrix venerupis strain DSM 28755 Ga0181026_119, whole genome

Gene Summary

Adenine Count

1080693 bp

Thymine Count

1091741 bp

Guanine Count

468003 bp

Cytosine Count

482828 bp

Genome Length

3123464 bp

Protein-coding Genes

2804 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-deoxy-alpha-d-manno-octulosonate 8-oxidaseCLV86_2800Not AvailableNegative3016045 - 301712740405.7
chloramphenicol o-acetyltransferase type aCLV86_2801Not AvailableNegative3017161 - 301777823700.3
putative hydrolase of the had superfamilyCLV86_2802Not AvailableNegative3017781 - 301848526976.6
3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase)CLV86_2803Not AvailableNegative3018476 - 301918927479.2
uncharacterized protein duf4126CLV86_2804Not AvailableNegative3019266 - 301982919200.8
hypothetical proteinCLV86_2805Not AvailableNegative3019810 - 30200349056.34
exodeoxyribonuclease-5CLV86_2806Not AvailableNegative3020065 - 302149254331.2
hypothetical proteinCLV86_2807Not AvailablePositive3021616 - 302235027779.7
uncharacterized protein duf3822CLV86_2808Not AvailablePositive3022334 - 302315532023.1
16s rrna (guanine(966)-n(2))-methyltransferase rsmdCLV86_2809Not AvailablePositive3023156 - 302371321208.9

Displaying genes 2781 – 2790 of 2862 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.