Lacinutrix venerupis str. DSM 28755

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Lacinutrix

Description

Lacinutrix venerupis str. DSM 28755 is a bacterial strain characterized by its single replicon structure, indicating a streamlined genomic organization. This trait may contribute to the efficiency of its cellular processes, potentially enhancing its adaptability to various environments. The strain is cataloged under the accession number RCCH00000000.1, which provides a unique identifier for its genomic data within biological databases. While specific ecological roles or metabolic capabilities of Lacinutrix venerupis str. DSM 28755 are not detailed, the streamlined genome suggests a potential for niche specialization, allowing it to thrive in specific habitats. This adaptability could be an advantage in environments with fluctuating conditions, where organisms with fewer genomic complexities may respond more rapidly to changes. Understanding the genomic structure of Lacinutrix venerupis str. DSM 28755 may provide insights into its ecological interactions and evolutionary strategies. The existence of a single replicon might imply a focus on particular metabolic pathways that are advantageous for survival in its native habitat. Further research into this strain could shed light on its ecological significance and potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusLacinutrix
SpeciesLacinutrix venerupis
StrainDSM 28755

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lacinutrix venerupis strain DSM 28755 Ga0181026_119, whole genome

Gene Summary

Adenine Count

1080693 bp

Thymine Count

1091741 bp

Guanine Count

468003 bp

Cytosine Count

482828 bp

Genome Length

3123464 bp

Protein-coding Genes

2804 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
iron complex transport system atp-binding proteinCLV86_2107Not AvailableNegative2236776 - 223757029220.7
iron complex transport system permease proteinCLV86_2108Not AvailableNegative2237572 - 223858836173.7
iron complex transport system substrate-binding proteinCLV86_2109Not AvailableNegative2238589 - 223974343407.7
iron complex outermembrane receptor proteinCLV86_2110Not AvailablePositive2240065 - 224190069661.2
hypothetical proteinCLV86_2111Not AvailablePositive2241922 - 224297737928.4
uncharacterized protein (tigr00290 family)CLV86_2112Not AvailableNegative2243043 - 224374126441.8
c-terminal processing protease ctpa/prcCLV86_2113Not AvailableNegative2243731 - 224513451809.2
rna polymerase sigma-70 factor (ecf subfamily)CLV86_2114Not AvailablePositive2245213 - 224575821490.2
hypothetical proteinCLV86_2115Not AvailablePositive2245745 - 224622418467.5
uncharacterized protein duf4252CLV86_2116Not AvailablePositive2246315 - 224690821886.7

Displaying genes 2101 – 2110 of 2862 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.