Methanosarcina sp. 2.H.A.1B.4

Cocci

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanomicrobia

Order

Methanosarcinales

Family

Methanosarcinaceae

Genus

Methanosarcina

Description

Methanosarcina sp. 2.H.A.1B.4 is a species of cocci-shaped microorganisms characterized by the presence of flagella, which may contribute to its motility in various environments. This species possesses a single replicon, indicating a streamlined genetic structure that could influence its replication and evolutionary processes. The organism is cataloged under the accession number JJOV00000000.1, which provides a reference for its genomic data. As a member of the Methanosarcina genus, this species is likely involved in anaerobic methane production, a critical process in the carbon cycle. Methanosarcina species are known for their ability to utilize a variety of substrates, including acetate and methanol, for methanogenesis. This metabolic flexibility allows them to thrive in diverse anaerobic environments, such as sediments, wetlands, and the digestive tracts of ruminants. The presence of flagella suggests that Methanosarcina sp. 2.H.A.1B.4 may possess enhanced mobility in its habitat, potentially aiding in its ability to locate optimal niches for growth and substrate utilization. This motility can be significant in dynamic environments where nutrient availability fluctuates. In ecological terms, Methanosarcina sp. 2.H.A.1B.4 may play a vital role in nutrient cycling, particularly in anaerobic ecosystems where methane production is essential for energy flow. Its activities can influence greenhouse gas emissions and contribute to the overall health of microbial communities in these environments.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanomicrobia
OrderMethanosarcinales
FamilyMethanosarcinaceae
GenusMethanosarcina
SpeciesMethanosarcina sp. 2.H.A.1B.4
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methanosarcina sp. 2.H.A.1B.4


Gene Summary

Adenine Count

1111758 bp

Thymine Count

1117810 bp

Guanine Count

838027 bp

Cytosine Count

839356 bp

Genome Length

3907151 bp

Protein-coding Genes

3154 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5s ribosomal rnaNot AvailableNot AvailablePositive24 - 145Not Available
16s ribosomal rnaNot AvailableNot AvailablePositive147 - 1630Not Available
methyltransferase type 12EO92_15415Not AvailableNegative437 - 114727083.1
hydantoinaseEO92_15425Not AvailablePositive1501 - 342969419.2
23s ribosomal rnaNot AvailableNot AvailablePositive1831 - 4648Not Available
serine/threonine protein phosphataseEO92_15430Q58322Positive3597 - 429826445.8
hypothetical proteinEO92_15435Not AvailableNegative4310 - 470814551.5
5s ribosomal rnaNot AvailableNot AvailablePositive4795 - 4916Not Available
phosphodiesteraseEO92_15440Q58346Negative4958 - 545817832.4
7-cyano-7-deazaguanine synthaseEO92_15445Q8TIF3Positive5670 - 636525321.0

Displaying genes 1 – 10 of 3212 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

167 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000344(2R,3S)-homoisocitrateC7H7O7Chemical structure of (2R,3S)-homoisocitrateNot available
Average203.128Da
Monoisotopic203.020823305Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000515mycothioneC34H58N4O24S2Chemical structure of mycothioneNot available
Average970.96Da
Monoisotopic970.2882411Da
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da

Displaying 1–10 of 167 metabolites

Health Effects

No health effects information available for this bacterium.