Halorubrum sp. E3

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sp. E3 is a rod-shaped archaeon known for its adaptability to extreme environments, particularly hypersaline conditions. One of its defining characteristics is the presence of flagella, which suggests that this organism is motile, allowing it to navigate its often harsh surroundings effectively. Genetically, Halorubrum sp. E3 has a single replicon, indicating a streamlined genomic structure that is common among many extremophiles. This trait may contribute to the organism's efficiency in replication and adaptation to fluctuating environmental conditions. The accession number for Halorubrum sp. E3 is NHPI00000000.1, which provides a reference for researchers seeking to explore its genetic and functional attributes further. From a biological and ecological perspective, the presence of flagella in Halorubrum sp. E3 may enhance its survival and competitive edge in extreme saline habitats. The ability to move toward favorable conditions, such as areas with optimal nutrient availability or less extreme salinity, underscores the ecological significance of motility in extremophiles. This adaptability is crucial for maintaining population dynamics and ecosystem function in hypersaline environments, where few organisms can thrive.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sp. E3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sp. E3 contig2568, whole genome shotgun sequence.

Gene Summary

Adenine Count

730074 bp

Thymine Count

719652 bp

Guanine Count

1376157 bp

Cytosine Count

1378468 bp

Genome Length

4204396 bp

Protein-coding Genes

4973 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna adenine methylaseDJ71_08155Not AvailableNegative1147391 - 114819230824.0
deoxyribonucleaseDJ71_08160Not AvailablePositive1148193 - 114882622670.4
hypothetical proteinDJ71_08190Not AvailableNegative1153467 - 115376010459.1
hypothetical proteinDJ71_08195Not AvailableNegative1153886 - 115446419403.5
hypothetical proteinDJ71_08200Not AvailablePositive1154624 - 115503114225.3
3-hydroxybutyryl-coa dehydrogenaseDJ71_08205Not AvailablePositive1155032 - 115563121714.4
electron transfer flavoproteinDJ71_08210Not AvailablePositive1155693 - 115600411353.4
(2fe-2s)-binding proteinDJ71_08215Not AvailablePositive1156008 - 115647216485.5
50s ribosomal protein l3DJ71_08225Not AvailablePositive1157182 - 115770719372.7
2-ketoglutarate ferredoxin oxidoreductase subunit alphaDJ71_08240Not AvailableNegative1158374 - 115965346242.0

Displaying genes 1441 – 1450 of 5037 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.