Halorubrum sp. C3

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sp. C3 is a rod-shaped archaeon characterized by the presence of flagella, which suggests motility in its environment. This organism possesses a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various ecological niches. The accession number for Halorubrum sp. C3 is NHOB00000000.1, which provides a reference for further genomic studies and comparisons within microbial databases. The rod shape of Halorubrum sp. C3 may facilitate its movement and nutrient acquisition in its natural habitat, likely involving saline environments where members of the Halorubrum genus are typically found. The presence of flagella enhances its ability to navigate through such environments, potentially allowing it to exploit different ecological niches and resources. From an ecological perspective, the motility conferred by flagella may enable Halorubrum sp. C3 to compete effectively with other microorganisms, ultimately influencing community dynamics within hypersaline ecosystems. The single replicon may further indicate a level of evolutionary efficiency, allowing Halorubrum sp. C3 to thrive under specific conditions that may be hostile to other organisms. Overall, the traits of Halorubrum sp. C3 underscore its potential role in salt-rich environments and its capacity for adaptation and survival.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sp. C3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sp. C3 contig0829, whole genome shotgun sequence.

Gene Summary

Adenine Count

570548 bp

Thymine Count

565442 bp

Guanine Count

1094520 bp

Cytosine Count

1091193 bp

Genome Length

3322164 bp

Protein-coding Genes

3572 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
toxin-antitoxin system, toxin componentDJ68_00835Not AvailableNegative139044 - 14036949074.6
is4 family transposaseDJ68_00840Not AvailablePositive141350 - 14201725689.3
duf1931 domain-containing proteinDJ68_00845Not AvailablePositive142455 - 1426226149.05
ribose 5-phosphate isomerase aDJ68_00850Not AvailableNegative142709 - 14322317046.8
hypothetical proteinDJ68_00855Not AvailableNegative143224 - 14363114359.5
dna adenine methylaseDJ68_00860Not AvailableNegative143889 - 14461127493.5
hypothetical proteinDJ68_00865Not AvailableNegative144725 - 14502410720.3
hypothetical proteinDJ68_00870Not AvailablePositive145362 - 1456499991.3
sugar nucleotidyltransferaseDJ68_00875Not AvailableNegative146225 - 14661613549.8
isocitrate dehydrogenase (nadp(+))DJ68_00880Not AvailableNegative146848 - 14811045674.0

Displaying genes 181 – 190 of 3629 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.