Vibrio ishigakensis str. JCM 19241

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio ishigakensis str. JCM 19241 is characterized by having a single replicon, which is significant for understanding its genetic structure and replication processes. The strain is cataloged under the accession number BBSC00000000.1, which provides a reference for its genomic data. As a member of the Vibrio genus, V. ishigakensis typically inhabits marine environments, suggesting that it may play a role in aquatic ecosystems. This strain can be of particular interest in studies related to microbial diversity in coastal waters and the potential ecological interactions it may have with other marine organisms. The presence of a single replicon can indicate a streamlined genomic organization, potentially influencing its adaptability and survival in specific niches within marine habitats. Understanding the genomic features of V. ishigakensis may enhance our knowledge of its ecological functions and interactions in the marine microbiome, contributing to broader studies on microbial ecology and environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio ishigakensis
StrainJCM 19241

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio ishigakensis str. JCM 19241
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio ishigakensis DNA, contig00033, strain: JCM19241, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

6132 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp synthase gamma chainJCM19241_1963Not AvailablePositive4512957 - 451335815084.0
atp synthase beta chainJCM19241_1964Not AvailablePositive4513394 - 451479750676.7
atp synthase epsilon chainJCM19241_1965Not AvailablePositive4514816 - 451523815278.2
n-acetylglucosamine-1-phosphate uridyltransferaseJCM19241_1966Not AvailablePositive4515373 - 451673748820.1
putative amino acid abc transporterJCM19241_1967Not AvailableNegative4516938 - 451738716949.0
putative amino acid abc transporterJCM19241_1968Not AvailableNegative4517486 - 45176807012.72
cyclohexadienyl dehydrataseJCM19241_1969Not AvailablePositive4517773 - 451854928755.6
membrane fusion proteinJCM19241_1970Not AvailableNegative4518588 - 451969741091.1
permease of the major facilitator superfamilyJCM19241_1971Not AvailableNegative4519805 - 452012811970.6
hypothetical proteinJCM19241_1972Not AvailablePositive4520238 - 452051310525.0

Displaying genes 5861 – 5870 of 6218 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.