Vibrio ishigakensis str. JCM 19241

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio ishigakensis str. JCM 19241 is characterized by having a single replicon, which is significant for understanding its genetic structure and replication processes. The strain is cataloged under the accession number BBSC00000000.1, which provides a reference for its genomic data. As a member of the Vibrio genus, V. ishigakensis typically inhabits marine environments, suggesting that it may play a role in aquatic ecosystems. This strain can be of particular interest in studies related to microbial diversity in coastal waters and the potential ecological interactions it may have with other marine organisms. The presence of a single replicon can indicate a streamlined genomic organization, potentially influencing its adaptability and survival in specific niches within marine habitats. Understanding the genomic features of V. ishigakensis may enhance our knowledge of its ecological functions and interactions in the marine microbiome, contributing to broader studies on microbial ecology and environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio ishigakensis
StrainJCM 19241

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio ishigakensis str. JCM 19241
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio ishigakensis DNA, contig00033, strain: JCM19241, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

6132 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carbon storage regulatorJCM19241_4784Not AvailablePositive3817819 - 38180167112.7
Trna-serNot AvailableNot AvailablePositive3818192 - 3818282Not Available
Trna-argNot AvailableNot AvailablePositive3818314 - 3818389Not Available
Trna-serNot AvailableNot AvailablePositive3818412 - 3818504Not Available
oligopeptide transport atp-binding protein oppfJCM19241_4326Not AvailableNegative3818749 - 381975036790.2
oligopeptide transport system permease protein oppbJCM19241_4327Not AvailableNegative3819747 - 382072135992.0
oligopeptide transport system permease protein oppcJCM19241_4328Not AvailableNegative3820742 - 382164433491.8
oligopeptide transport system permease protein oppbJCM19241_4329Not AvailableNegative3821701 - 382257932331.4
oligopeptide abc transporterJCM19241_4330Not AvailableNegative3822677 - 382430860678.4
molybdenum cofactor biosynthesis protein moaeJCM19241_4331Not AvailableNegative3824822 - 382527416900.1

Displaying genes 4951 – 4960 of 6218 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.