Vibrio ishigakensis str. JCM 19241

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio ishigakensis str. JCM 19241 is characterized by having a single replicon, which is significant for understanding its genetic structure and replication processes. The strain is cataloged under the accession number BBSC00000000.1, which provides a reference for its genomic data. As a member of the Vibrio genus, V. ishigakensis typically inhabits marine environments, suggesting that it may play a role in aquatic ecosystems. This strain can be of particular interest in studies related to microbial diversity in coastal waters and the potential ecological interactions it may have with other marine organisms. The presence of a single replicon can indicate a streamlined genomic organization, potentially influencing its adaptability and survival in specific niches within marine habitats. Understanding the genomic features of V. ishigakensis may enhance our knowledge of its ecological functions and interactions in the marine microbiome, contributing to broader studies on microbial ecology and environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio ishigakensis
StrainJCM 19241

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio ishigakensis str. JCM 19241
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio ishigakensis DNA, contig00033, strain: JCM19241, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

6132 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinJCM19241_1751Not AvailablePositive3532104 - 353401170956.9
transcription elongation factor grebJCM19241_1752Not AvailablePositive3534072 - 353457219795.5
two-component system response regulator omprJCM19241_1753Not AvailablePositive3534787 - 353550627243.1
osmolarity sensory histidine kinase envzJCM19241_1754Not AvailablePositive3535514 - 353690852512.1
nfua fe-s protein maturationJCM19241_1755Not AvailableNegative3536958 - 353754821275.0
biotin synthesis protein biohJCM19241_1756Not AvailablePositive3538441 - 353924729741.7
3'(2'),5'-bisphosphate nucleotidaseJCM19241_1757Not AvailableNegative3539198 - 35394529100.89
3'(2'),5'-bisphosphate nucleotidaseJCM19241_1758Not AvailableNegative3539452 - 354001520910.1
adp compounds hydrolase nudeJCM19241_1759Not AvailableNegative3540017 - 354057120712.8
general secretion pathway protein nJCM19241_1760Not AvailableNegative3540711 - 354140025036.9

Displaying genes 4561 – 4570 of 6218 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.