Vibrio ishigakensis str. JCM 19241

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio ishigakensis str. JCM 19241 is characterized by having a single replicon, which is significant for understanding its genetic structure and replication processes. The strain is cataloged under the accession number BBSC00000000.1, which provides a reference for its genomic data. As a member of the Vibrio genus, V. ishigakensis typically inhabits marine environments, suggesting that it may play a role in aquatic ecosystems. This strain can be of particular interest in studies related to microbial diversity in coastal waters and the potential ecological interactions it may have with other marine organisms. The presence of a single replicon can indicate a streamlined genomic organization, potentially influencing its adaptability and survival in specific niches within marine habitats. Understanding the genomic features of V. ishigakensis may enhance our knowledge of its ecological functions and interactions in the marine microbiome, contributing to broader studies on microbial ecology and environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio ishigakensis
StrainJCM 19241

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio ishigakensis str. JCM 19241
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio ishigakensis DNA, contig00033, strain: JCM19241, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

6132 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
o-antigen ligaseJCM19241_1721Not AvailablePositive3509268 - 351023035552.3
adp-heptose-lipooligosaccharide heptosyltransferase iiJCM19241_1722Not AvailablePositive3510187 - 351127840326.0
putative two-domain glycosyltransferaseJCM19241_1723Not AvailablePositive3511309 - 351209129688.3
hypothetical proteinJCM19241_1724Not AvailablePositive3512334 - 35124564502.48
poly(glycerol-phosphate) alpha-glucosyltransferaseJCM19241_1725Not AvailablePositive3512521 - 351295216290.7
poly(glycerol-phosphate) alpha-glucosyltransferaseJCM19241_1726Not AvailablePositive3512925 - 35131799023.8
udp-4-amino-4-deoxy-l-arabinose-oxoglutarate aminotransferaseJCM19241_1727Not AvailablePositive3513315 - 351439139857.5
hypothetical proteinJCM19241_1728Not AvailablePositive3514853 - 35149814711.82
glycosyl transferaseJCM19241_1729Not AvailableNegative3516453 - 351710324108.5
glycosyltransferaseJCM19241_1730Not AvailableNegative3517641 - 351835125944.3

Displaying genes 4531 – 4540 of 6218 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.