Vibrio ishigakensis str. JCM 19241

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio ishigakensis str. JCM 19241 is characterized by having a single replicon, which is significant for understanding its genetic structure and replication processes. The strain is cataloged under the accession number BBSC00000000.1, which provides a reference for its genomic data. As a member of the Vibrio genus, V. ishigakensis typically inhabits marine environments, suggesting that it may play a role in aquatic ecosystems. This strain can be of particular interest in studies related to microbial diversity in coastal waters and the potential ecological interactions it may have with other marine organisms. The presence of a single replicon can indicate a streamlined genomic organization, potentially influencing its adaptability and survival in specific niches within marine habitats. Understanding the genomic features of V. ishigakensis may enhance our knowledge of its ecological functions and interactions in the marine microbiome, contributing to broader studies on microbial ecology and environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio ishigakensis
StrainJCM 19241

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio ishigakensis str. JCM 19241
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio ishigakensis DNA, contig00033, strain: JCM19241, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

6132 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna 2-thiouridine synthesizing protein eJCM19241_3499Not AvailableNegative2233953 - 223428212426.0
putative tegt family carrier/transport proteinJCM19241_3500Not AvailableNegative2234378 - 223504023837.0
abc-type polar amino acid transport systemJCM19241_3501Not AvailableNegative2235274 - 223602328486.6
amino acid abc transporterJCM19241_3502Not AvailableNegative2236040 - 223642314282.7
glutamate aspartate transport system permease protein gltkJCM19241_3503Not AvailableNegative2236426 - 223713626606.2
glutamate aspartate transport system permease protein gltjJCM19241_3504Not AvailableNegative2237149 - 223835143465.0
glutamate aspartate periplasmic binding protein precursor gltiJCM19241_3505Not AvailableNegative2238442 - 223875311283.5
glutamate aspartate periplasmic binding protein precursor gltiJCM19241_3506Not AvailableNegative2238726 - 223934322024.0
siroheme synthaseJCM19241_3507Not AvailablePositive2240124 - 224084627230.7
hypothetical protein yajqJCM19241_3508Not AvailableNegative2240894 - 224137618285.9

Displaying genes 2901 – 2910 of 6218 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.