Vibrio ishigakensis str. JCM 19241

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio ishigakensis str. JCM 19241 is characterized by having a single replicon, which is significant for understanding its genetic structure and replication processes. The strain is cataloged under the accession number BBSC00000000.1, which provides a reference for its genomic data. As a member of the Vibrio genus, V. ishigakensis typically inhabits marine environments, suggesting that it may play a role in aquatic ecosystems. This strain can be of particular interest in studies related to microbial diversity in coastal waters and the potential ecological interactions it may have with other marine organisms. The presence of a single replicon can indicate a streamlined genomic organization, potentially influencing its adaptability and survival in specific niches within marine habitats. Understanding the genomic features of V. ishigakensis may enhance our knowledge of its ecological functions and interactions in the marine microbiome, contributing to broader studies on microbial ecology and environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio ishigakensis
StrainJCM 19241

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio ishigakensis str. JCM 19241
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio ishigakensis DNA, contig00033, strain: JCM19241, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

6132 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
proline iminopeptidaseJCM19241_911Not AvailableNegative1450539 - 145083211035.9
trk system potassium uptake protein trkaJCM19241_912Not AvailablePositive1451060 - 145172223821.2
potassium uptake proteinJCM19241_913Not AvailablePositive1451803 - 145226416664.2
potassium uptake proteinJCM19241_914Not AvailablePositive1452293 - 145308427949.1
secreted proteinJCM19241_915Not AvailableNegative1453122 - 145385627586.2
membrane proteinJCM19241_916Not AvailableNegative1453869 - 145437518533.2
membrane proteinJCM19241_917Not AvailableNegative1454368 - 145646775851.1
hypothetical proteinJCM19241_918Not AvailableNegative1456967 - 145753921720.5
histidinol-phosphate aminotransferaseJCM19241_919Not AvailableNegative1457910 - 145899540183.6
6-aminohexanoate-dimer hydrolaseJCM19241_920Not AvailableNegative1459000 - 146000437018.8

Displaying genes 1881 – 1890 of 6218 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.