Vibrio ishigakensis str. JCM 19231

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio ishigakensis str. JCM 19231 is a bacterial strain characterized by having a single replicon. The strain is cataloged under the accession number BBRZ00000000.1, which indicates its genomic data is available in public databases for further study. This species of Vibrio is known for its role in aquatic ecosystems, where it can be found in marine environments. As a member of the Vibrionaceae family, V. ishigakensis contributes to the microbial diversity in these habitats. The presence of Vibrio species in coastal waters is often linked to various ecological functions, including nutrient cycling and interactions with other marine organisms. Vibrio ishigakensis may play a role in the health of marine ecosystems, potentially influencing the dynamics of microbial communities and the overall ecological balance. The availability of its genomic information allows for deeper insights into its metabolic capabilities and ecological interactions, which may be valuable for understanding its role within marine microbiomes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio ishigakensis
StrainJCM 19231

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio ishigakensis str. JCM 19231
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio ishigakensis DNA, contig00260, whole genome shotgun

Gene Summary

Adenine Count

1263039 bp

Thymine Count

1273974 bp

Guanine Count

1106917 bp

Cytosine Count

1070021 bp

Genome Length

4713951 bp

Protein-coding Genes

5870 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulator, iclr familyJCM19231_1559Not AvailableNegative3726280 - 372697825824.1
hypothetical proteinJCM19231_1560Not AvailableNegative3727158 - 372744811133.4
hypothetical proteinJCM19231_1561Not AvailablePositive3728065 - 372870023664.4
hypothetical proteinJCM19231_1562Not AvailablePositive3729199 - 37294357913.29
long-chain fatty acid transport proteinJCM19231_1563Not AvailablePositive3729442 - 373034732718.1
flavodoxin reductasesJCM19231_1564Not AvailablePositive3730515 - 373161240054.9
linoleoyl-coa desaturaseJCM19231_1565Not AvailablePositive3731621 - 373268240787.2
hypothetical proteinJCM19231_1566Not AvailableNegative3732850 - 37330145531.72
beta-glucoside-specific iib componentJCM19231_1567Not AvailableNegative3733141 - 373435242187.4
beta-glucoside-specific iib componentJCM19231_1568Not AvailableNegative3734352 - 37345677768.25

Displaying genes 4761 – 4770 of 5926 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.