Spirochaeta lutea str. JC230

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Spirochaetaceae

Genus

Spirochaeta

Description

Spirochaeta lutea str. JC230 is characterized by having a single replicon, indicative of its genomic simplicity. The complete genomic sequence can be found under the accession number JNUP00000000.1. This bacterium belongs to the phylum Spirochaetes, which is known for its distinctive spiral shape and unique motility, typically through a corkscrew-like motion facilitated by its axial filaments. As a member of the Spirochaeta genus, S. lutea str. JC230 may play a significant role in its ecological niche, particularly in environments where spirochetes are prevalent. These bacteria are often found in anaerobic habitats, including deep-sea sediments, freshwater environments, and even in symbiotic relationships with various organisms. The ecological role of S. lutea str. JC230 could involve contributing to nutrient cycling and the degradation of organic matter, though specific interactions and contributions to its ecosystem have not been detailed. Understanding the genomic characteristics of S. lutea str. JC230, particularly its single replicon structure, can provide insights into its evolutionary adaptations and metabolic capabilities. Such traits might indicate a streamlined genome that is well-suited for its ecological niche, allowing it to thrive in specific environments where resources may be limited. The study of this organism could enhance our knowledge of microbial diversity and the functional roles of spirochetes in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilySpirochaetaceae
GenusSpirochaeta
SpeciesSpirochaeta lutea
StrainJC230

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Spirochaeta lutea str. JC230
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Spirochaeta lutea strain JC230 contig881, whole genome shotgun

Gene Summary

Adenine Count

813088 bp

Thymine Count

820031 bp

Guanine Count

943224 bp

Cytosine Count

955228 bp

Genome Length

3532909 bp

Protein-coding Genes

2303 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDC28_15070Not AvailableNegative3464799 - 346511611609.9
hypothetical proteinDC28_15075Not AvailablePositive3465333 - 346678753633.4
hypothetical proteinDC28_15080Not AvailableNegative3466889 - 346722712705.4
hypothetical proteinDC28_15085Not AvailablePositive3467468 - 34676867941.24
hypothetical proteinDC28_15090Not AvailableNegative3467698 - 346863034754.6
hypothetical proteinDC28_15095Not AvailableNegative3468627 - 346968838991.1
sugar abc transporter permeaseDC28_15105Not AvailableNegative3471520 - 347234130932.2
sugar abc transporter permeaseDC28_15110Not AvailableNegative3472351 - 347323532721.3
hypothetical proteinDC28_15115Not AvailableNegative3473306 - 347470051107.5
hypothetical proteinDC28_15120Not AvailablePositive3474996 - 347600037862.4

Displaying genes 2301 – 2310 of 2355 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.