Marinobacter sp. HL-58

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Marinobacteraceae

Genus

Marinobacter

Description

Marinobacter sp. HL-58 is a marine bacterium characterized by the presence of flagella, which facilitates motility in aquatic environments. It has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in its ecological niche. The strain is cataloged under the accession number LIHP00000000.1. The presence of flagella not only aids in movement but may also play a role in the bacterium's interactions with its surroundings, such as attachment to surfaces or other microbial communities. This trait can enhance its ability to colonize various marine habitats, potentially influencing nutrient cycling and microbial dynamics in those ecosystems. In summary, Marinobacter sp. HL-58 showcases important traits such as flagella presence and a single replicon, which together suggest a well-adapted organism capable of thriving in marine environments. Its motility may contribute to ecological processes, highlighting the significance of flagellated bacteria in marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyMarinobacteraceae
GenusMarinobacter
SpeciesMarinobacter sp. HL-58
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Marinobacter sp. HL-58 ITZY_scaf_18, whole genome shotgun

Gene Summary

Adenine Count

905531 bp

Thymine Count

894562 bp

Guanine Count

1209850 bp

Cytosine Count

1233540 bp

Genome Length

4243535 bp

Protein-coding Genes

3757 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
indole-3-glycerol phosphate synthase trpcHLUCCO03_00645C1DHY7Negative88786 - 8960730546.8
anthranilate phosphoribosyltransferase trpdHLUCCO03_00640A1U6H0Negative89775 - 9080336193.8
anthranilate synthase amidotransferase component trpgHLUCCO03_00635P00901Negative91268 - 9184621405.8
anthranilate synthase aminase component trpeHLUCCO03_00630P20580Negative91863 - 9335055370.0
phosphoglycolate phosphataseHLUCCO03_00625Q88QS2Negative93529 - 9421824435.1
ribulose-phosphate 3-epimerase rpeHLUCCO03_00620P0AG09Negative94215 - 9490125041.2
protein of unknown function duf3530HLUCCO03_00615Not AvailablePositive95031 - 9602035013.1
uncharacterized proteinHLUCCO03_00610Not AvailableNegative96026 - 963139358.38
dnaj like chaperone proteinHLUCCO03_00605P31680Negative96421 - 9717628689.9
nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translatiHLUCCO03_00600Q88QT2Negative97180 - 9786024704.9

Displaying genes 81 – 90 of 3802 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

277 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000234(3R)-hydroxybutanoate dimerC8H13O5Chemical structure of (3R)-hydroxybutanoate dimerNot available
Average189.188Da
Monoisotopic189.0768471Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 277 metabolites

Health Effects

No health effects information available for this bacterium.