Pseudomonas helmanticensis str. BIGb0525

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas helmanticensis str. BIGb0525 is characterized by having a single replicon. The genomic data for this strain is available under the accession number SOCQ00000000.1. This information is crucial as it suggests a streamlined genomic architecture, which may influence the organism's metabolic capabilities and adaptability. Pseudomonas species are known for their versatility and ability to thrive in diverse environments, often exhibiting characteristics such as resistance to antibiotics and the capacity for bioremediation. The presence of a single replicon in Pseudomonas helmanticensis str. BIGb0525 could reflect specific evolutionary adaptations that allow it to efficiently manage its genetic material in various ecological niches. In the broader context of microbiology, understanding the genomic structure of strains like Pseudomonas helmanticensis is vital for elucidating their roles in ecosystems, particularly in nutrient cycling and environmental interactions. The single replicon may confer advantages in replicative efficiency under certain conditions, potentially impacting its ecological fitness and competitive dynamics within microbial communities. Overall, the traits of Pseudomonas helmanticensis str. BIGb0525 highlight its potential significance in ecological studies, especially in environments where Pseudomonas species play critical roles in degradation processes or the cycling of nutrients.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas helmanticensis
StrainBIGb0525

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas helmanticensis str. BIGb0525
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas helmanticensis strain BIGb0525 Ga0304788_142, whole

Gene Summary

Adenine Count

1358289 bp

Thymine Count

1354814 bp

Guanine Count

1953384 bp

Cytosine Count

1961511 bp

Genome Length

6628093 bp

Protein-coding Genes

5779 genes

Non-Coding Genes

249 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid abc transporter substrate-binding protein (paat family)EDF87_106169Not AvailableNegative2320478 - 232104720747.0
uncharacterized protein duf4399EDF87_106170Not AvailablePositive2321183 - 232160814607.7
d-3-phosphoglycerate dehydrogenaseEDF87_106171Not AvailableNegative2321672 - 232290144147.2
fad/fmn-containing dehydrogenaseEDF87_106172Not AvailablePositive2323082 - 232450051785.9
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase in catechol pathwayEDF87_106173Not AvailablePositive2324542 - 232520723497.3
uncharacterized protein yjikEDF87_106174Not AvailablePositive2325471 - 232639434883.8
uncharacterized protein yjikEDF87_106175Not AvailablePositive2326623 - 232754034324.4
ribose-5-phosphate isomeraseEDF87_106176Not AvailableNegative2327689 - 232836323443.3
l-threonine ammonia-lyaseEDF87_106177Not AvailablePositive2328511 - 233002555121.8
putative membrane proteinEDF87_106178Not AvailablePositive2330066 - 233047914979.0

Displaying genes 2241 – 2250 of 6028 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.