Pseudomonas helmanticensis str. BIGb0525

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas helmanticensis str. BIGb0525 is characterized by having a single replicon. The genomic data for this strain is available under the accession number SOCQ00000000.1. This information is crucial as it suggests a streamlined genomic architecture, which may influence the organism's metabolic capabilities and adaptability. Pseudomonas species are known for their versatility and ability to thrive in diverse environments, often exhibiting characteristics such as resistance to antibiotics and the capacity for bioremediation. The presence of a single replicon in Pseudomonas helmanticensis str. BIGb0525 could reflect specific evolutionary adaptations that allow it to efficiently manage its genetic material in various ecological niches. In the broader context of microbiology, understanding the genomic structure of strains like Pseudomonas helmanticensis is vital for elucidating their roles in ecosystems, particularly in nutrient cycling and environmental interactions. The single replicon may confer advantages in replicative efficiency under certain conditions, potentially impacting its ecological fitness and competitive dynamics within microbial communities. Overall, the traits of Pseudomonas helmanticensis str. BIGb0525 highlight its potential significance in ecological studies, especially in environments where Pseudomonas species play critical roles in degradation processes or the cycling of nutrients.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas helmanticensis
StrainBIGb0525

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas helmanticensis str. BIGb0525
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas helmanticensis strain BIGb0525 Ga0304788_142, whole

Gene Summary

Adenine Count

1358289 bp

Thymine Count

1354814 bp

Guanine Count

1953384 bp

Cytosine Count

1961511 bp

Genome Length

6628093 bp

Protein-coding Genes

5779 genes

Non-Coding Genes

249 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
heptosyltransferase-1EDF87_105230Not AvailableNegative2063507 - 206456839218.7
heptosyltransferase-2EDF87_105231Not AvailableNegative2064570 - 206563439470.8
glutamate-ammonia-ligase adenylyltransferaseEDF87_105232Not AvailableNegative2066051 - 2068990109552.0
pyruvate dehydrogenase e1 componentEDF87_105233Not AvailablePositive2069375 - 207202099544.4
pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase)EDF87_105234Not AvailablePositive2072032 - 207399666028.8
alkaline phosphatase dEDF87_105235Not AvailablePositive2074271 - 207566853003.8
diguanylate cyclase/phosphodiesterase with pas/pac and gaf sensor(s)EDF87_105236Not AvailablePositive2075912 - 2078608100677.0
peptide-methionine (s)-s-oxide reductaseEDF87_105237Not AvailablePositive2078790 - 207945524341.9
23s rrna (adenine2030-n6)-methyltransferaseEDF87_105238Not AvailableNegative2079585 - 208042431804.4
hypothetical proteinEDF87_105239Not AvailablePositive2080754 - 208116715792.8

Displaying genes 2011 – 2020 of 6028 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.