Pseudomonas helmanticensis str. BIGb0525

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas helmanticensis str. BIGb0525 is characterized by having a single replicon. The genomic data for this strain is available under the accession number SOCQ00000000.1. This information is crucial as it suggests a streamlined genomic architecture, which may influence the organism's metabolic capabilities and adaptability. Pseudomonas species are known for their versatility and ability to thrive in diverse environments, often exhibiting characteristics such as resistance to antibiotics and the capacity for bioremediation. The presence of a single replicon in Pseudomonas helmanticensis str. BIGb0525 could reflect specific evolutionary adaptations that allow it to efficiently manage its genetic material in various ecological niches. In the broader context of microbiology, understanding the genomic structure of strains like Pseudomonas helmanticensis is vital for elucidating their roles in ecosystems, particularly in nutrient cycling and environmental interactions. The single replicon may confer advantages in replicative efficiency under certain conditions, potentially impacting its ecological fitness and competitive dynamics within microbial communities. Overall, the traits of Pseudomonas helmanticensis str. BIGb0525 highlight its potential significance in ecological studies, especially in environments where Pseudomonas species play critical roles in degradation processes or the cycling of nutrients.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas helmanticensis
StrainBIGb0525

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas helmanticensis str. BIGb0525
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas helmanticensis strain BIGb0525 Ga0304788_142, whole

Gene Summary

Adenine Count

1358289 bp

Thymine Count

1354814 bp

Guanine Count

1953384 bp

Cytosine Count

1961511 bp

Genome Length

6628093 bp

Protein-coding Genes

5779 genes

Non-Coding Genes

249 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinEDF87_104166Not AvailablePositive1610327 - 161104326108.9
luciferase-type oxidoreductaseEDF87_104167Not AvailableNegative1611701 - 161270236716.3
lysr family transcriptional regulatorEDF87_104168Not AvailablePositive1612801 - 161372134207.6
2,4-dienoyl-coa reductase-like nadh-dependent reductase (old yellow enzyme family)EDF87_104169Not AvailableNegative1613815 - 161491840500.7
multidrug efflux system outer membrane proteinEDF87_104170Not AvailableNegative1615109 - 161651251161.8
multidrug efflux pumpEDF87_104171Not AvailableNegative1616502 - 1619657114000.0
membrane fusion protein (multidrug efflux system)EDF87_104172Not AvailableNegative1619668 - 162079240350.0
quinoprotein glucose dehydrogenaseEDF87_104173Not AvailableNegative1621363 - 162375086700.8
phenylacetaldehyde dehydrogenaseEDF87_104174Not AvailableNegative1623898 - 162541253802.2
2,4-dienoyl-coa reductase-like nadh-dependent reductase (old yellow enzyme family)EDF87_104175Not AvailableNegative1625675 - 162676639875.3

Displaying genes 1641 – 1650 of 6028 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.