Zhongshania aliphaticivorans

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Cellvibrionales

Family

Spongiibacteraceae

Genus

Zhongshania

Description

Zhongshania aliphaticivorans is a bacterial species characterized by a single replicon, indicating a streamlined genomic structure. Its genetic information is cataloged under the accession number NZ_CP014544.1, which can be referenced for further genomic studies and comparative analyses within the context of bacterial taxonomy and ecology. The genus Zhongshania falls within a group of microorganisms recognized for their potential role in the degradation of aliphatic compounds. This trait suggests that Z. aliphaticivorans may contribute to bioremediation processes, particularly in environments contaminated with hydrophobic organic pollutants. Understanding this species' metabolic capabilities can be crucial for developing strategies to mitigate environmental pollution. The presence of a single replicon may also imply a more efficient replication and maintenance of genetic material, which can be advantageous in variable environments where rapid adaptation is necessary. This efficiency could enhance the ecological resilience of Z. aliphaticivorans, allowing it to thrive in diverse habitats, particularly those rich in aliphatic compounds. In summary, Zhongshania aliphaticivorans is defined by its single replicon and its potential application in bioremediation. By utilizing its unique metabolic pathways, this bacterium may play a significant role in the ecological management of environments impacted by aliphatic hydrocarbons. Further research into its capabilities and interactions within microbial communities could provide valuable insights into its ecological significance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderCellvibrionales
FamilySpongiibacteraceae
GenusZhongshania
SpeciesZhongshania aliphaticivorans
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Zhongshania aliphaticivorans


Gene Summary

Adenine Count

1037966 bp

Thymine Count

1034089 bp

Guanine Count

1064071 bp

Cytosine Count

1068233 bp

Genome Length

4204359 bp

Protein-coding Genes

3702 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
oxygen-dependent coproporphyrinogen oxidaseAZF00_RS00010Not AvailablePositive549 - 145134221.0
shikimate dehydrogenaseAZF00_RS00015Not AvailablePositive1513 - 234629845.6
calcium/sodium antiporterAZF00_RS00020Not AvailablePositive2381 - 334933447.1
gamma carbonic anhydrase family proteinAZF00_RS00025Not AvailableNegative3398 - 396120357.3
m3 family metallopeptidaseAZF00_RS00030Not AvailablePositive4075 - 610874965.6
yhev family putative zinc ribbon proteinAZF00_RS00035Not AvailablePositive6113 - 640010798.9
stas/sec14 domain-containing proteinAZF00_RS00040Not AvailablePositive6514 - 689414598.8
rhodanese-like domain-containing proteinAZF00_RS00045Not AvailableNegative6956 - 728512124.5
trans-acting enoyl reductase family proteinAZF00_RS00050Not AvailableNegative7581 - 879843584.4
hypothetical proteinAZF00_RS19245Not AvailableNegative8910 - 90776479.66

Displaying genes 1 – 10 of 3759 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

33 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm0000686vanillateC8H7O4Chemical structure of vanillateNot available
Average167.1388Da
Monoisotopic167.0344337Da
BASm0000738D-lyxoseC5H10O5Chemical structure of D-lyxose1114-34-7
Average150.1299Da
Monoisotopic150.05282343Da
BASm0001785(2R,3R)-tartrateC4H6O6Chemical structure of (2R,3R)-tartrate87-69-4
Average150.0868Da
Monoisotopic150.0164379Da
BASm0001787(2R,3S)-tartrateC4H4O6Chemical structure of (2R,3S)-tartrateNot available
Average148.071Da
Monoisotopic148.001885Da
BASm0001788tartrateC4H4O6Chemical structure of tartrateNot available
Average148.071Da
Monoisotopic148.001885Da
BASm0001848D-lysineC6H14N2O2Chemical structure of D-lysine923-27-3
Average146.19Da
Monoisotopic146.1055277Da
BASm0001850D-arginineC6H15N4O2Chemical structure of D-arginine0157-06-02
Average175.2089Da
Monoisotopic175.1195007Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da

Displaying 1–10 of 33 metabolites

Health Effects

No health effects information available for this bacterium.