Zhongshania aliphaticivorans

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Cellvibrionales

Family

Spongiibacteraceae

Genus

Zhongshania

Description

Zhongshania aliphaticivorans is a bacterial species characterized by a single replicon, indicating a streamlined genomic structure. Its genetic information is cataloged under the accession number NZ_CP014544.1, which can be referenced for further genomic studies and comparative analyses within the context of bacterial taxonomy and ecology. The genus Zhongshania falls within a group of microorganisms recognized for their potential role in the degradation of aliphatic compounds. This trait suggests that Z. aliphaticivorans may contribute to bioremediation processes, particularly in environments contaminated with hydrophobic organic pollutants. Understanding this species' metabolic capabilities can be crucial for developing strategies to mitigate environmental pollution. The presence of a single replicon may also imply a more efficient replication and maintenance of genetic material, which can be advantageous in variable environments where rapid adaptation is necessary. This efficiency could enhance the ecological resilience of Z. aliphaticivorans, allowing it to thrive in diverse habitats, particularly those rich in aliphatic compounds. In summary, Zhongshania aliphaticivorans is defined by its single replicon and its potential application in bioremediation. By utilizing its unique metabolic pathways, this bacterium may play a significant role in the ecological management of environments impacted by aliphatic hydrocarbons. Further research into its capabilities and interactions within microbial communities could provide valuable insights into its ecological significance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderCellvibrionales
FamilySpongiibacteraceae
GenusZhongshania
SpeciesZhongshania aliphaticivorans
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Zhongshania aliphaticivorans strain SM-2 chromosome, complete

Gene Summary

Adenine Count

1037966 bp

Thymine Count

1034089 bp

Guanine Count

1064071 bp

Cytosine Count

1068233 bp

Genome Length

4204359 bp

Protein-coding Genes

3702 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
styrene-oxide isomerase stycAZF00_RS02800Not AvailablePositive647279 - 64776117318.6
helix-turn-helix domain-containing proteinAZF00_RS02805Not AvailablePositive647837 - 64886237977.1
nadp-dependent oxidoreductaseAZF00_RS02810Not AvailablePositive649122 - 65015037241.8
rnd family transporterAZF00_RS02815Not AvailablePositive650372 - 65281089637.8
duf1329 domain-containing proteinAZF00_RS02820Not AvailablePositive652903 - 65429452845.4
ycf48-related proteinAZF00_RS02825Not AvailablePositive654367 - 65537735640.0
duf1302 family proteinAZF00_RS02830Not AvailablePositive655433 - 65749976584.7
duf1329 domain-containing proteinAZF00_RS02835Not AvailablePositive657600 - 65897051510.6
phenylacetic acid degradation operon negative regulatory protein paaxAZF00_RS02840Not AvailableNegative659136 - 66006535688.3
3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing proteinAZF00_RS02845Not AvailableNegative660319 - 66242475233.2

Displaying genes 561 – 570 of 3759 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

33 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm0000686vanillateC8H7O4Chemical structure of vanillateNot available
Average167.1388Da
Monoisotopic167.0344337Da
BASm0000738D-lyxoseC5H10O5Chemical structure of D-lyxose1114-34-7
Average150.1299Da
Monoisotopic150.05282343Da
BASm0001785(2R,3R)-tartrateC4H6O6Chemical structure of (2R,3R)-tartrate87-69-4
Average150.0868Da
Monoisotopic150.0164379Da
BASm0001787(2R,3S)-tartrateC4H4O6Chemical structure of (2R,3S)-tartrateNot available
Average148.071Da
Monoisotopic148.001885Da
BASm0001788tartrateC4H4O6Chemical structure of tartrateNot available
Average148.071Da
Monoisotopic148.001885Da
BASm0001848D-lysineC6H14N2O2Chemical structure of D-lysine923-27-3
Average146.19Da
Monoisotopic146.1055277Da
BASm0001850D-arginineC6H15N4O2Chemical structure of D-arginine0157-06-02
Average175.2089Da
Monoisotopic175.1195007Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da

Displaying 1–10 of 33 metabolites

Health Effects

No health effects information available for this bacterium.