Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzae |
| Strain | DSM 28354 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1510969 bp
Thymine Count
1503814 bp
Guanine Count
1776646 bp
Cytosine Count
1778552 bp
Genome Length
6569981 bp
Protein-coding Genes
5670 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-methylcytosine-specific restriction endonuclease mcra | CLV58_102181 | Not Available | Negative | 673051 - 673566 | 19678.8 |
| ssra-binding protein | CLV58_102182 | Not Available | Negative | 673669 - 674130 | 18008.8 |
| periplasmic chaperone for outer membrane proteins skp | CLV58_102183 | Not Available | Negative | 674600 - 675199 | 22576.9 |
| hypothetical protein | CLV58_102184 | Not Available | Negative | 675247 - 675612 | 12971.5 |
| penicillin amidase | CLV58_102185 | Not Available | Negative | 675624 - 678074 | 91714.1 |
| glycerophosphoryl diester phosphodiesterase | CLV58_102186 | Not Available | Positive | 678169 - 679134 | 36641.0 |
| gh3 auxin-responsive promoter | CLV58_102187 | Not Available | Positive | 679203 - 680726 | 57493.9 |
| flavin reductase (dim6/ntab) family nadh-fmn oxidoreductase rutf | CLV58_102188 | Not Available | Negative | 680727 - 681215 | 18193.2 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | CLV58_102189 | Not Available | Positive | 681348 - 682577 | 46116.7 |
| uncharacterized lipoprotein yddw (upf0748 family) | CLV58_102190 | Not Available | Negative | 682567 - 684090 | 58521.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


