Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzae |
| Strain | DSM 28354 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1510969 bp
Thymine Count
1503814 bp
Guanine Count
1776646 bp
Cytosine Count
1778552 bp
Genome Length
6569981 bp
Protein-coding Genes
5670 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase primary sigma factor | CLV58_101349 | Not Available | Positive | 370275 - 371138 | 32639.1 |
| surface antigen-like protein | CLV58_101350 | Not Available | Negative | 371207 - 372451 | 46061.9 |
| sporulation related protein | CLV58_101351 | Not Available | Negative | 372627 - 373775 | 41563.9 |
| hypothetical protein | CLV58_101352 | Not Available | Negative | 373794 - 375467 | 62005.2 |
| outer membrane protein assembly factor bamd (bamd/coml family) | CLV58_101353 | Not Available | Negative | 375560 - 378736 | 117664.0 |
| putative metalloprotease with pdz domain | CLV58_101354 | Not Available | Positive | 378844 - 380700 | 69512.0 |
| rna polymerase sigma-70 factor (ecf subfamily) | CLV58_101355 | Not Available | Positive | 381078 - 381629 | 21567.6 |
| alkylation response protein aidb-like acyl-coa dehydrogenase | CLV58_101356 | Not Available | Positive | 381724 - 382851 | 41709.8 |
| lmbe family n-acetylglucosaminyl deacetylase | CLV58_101357 | Not Available | Positive | 382835 - 383578 | 27705.1 |
| nodulation protein s (nods) | CLV58_101358 | Not Available | Positive | 383675 - 384256 | 21793.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


