Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzae |
| Strain | DSM 28354 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1510969 bp
Thymine Count
1503814 bp
Guanine Count
1776646 bp
Cytosine Count
1778552 bp
Genome Length
6569981 bp
Protein-coding Genes
5670 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c-type biogenesis protein ccmf | CLV58_11444 | Not Available | Positive | 3985457 - 3988135 | 99958.1 |
| hypothetical protein | CLV58_11445 | Not Available | Positive | 3988248 - 3988484 | 8980.38 |
| na+/h+-dicarboxylate symporter | CLV58_11446 | Not Available | Negative | 3988541 - 3989785 | 44500.9 |
| ligand-binding srpbcc domain-containing protein | CLV58_11447 | Not Available | Negative | 3989932 - 3990381 | 17765.4 |
| two component regulator with propeller domain | CLV58_11448 | Not Available | Positive | 3990537 - 3994514 | 148054.0 |
| lyttr dna-binding domain-containing protein | CLV58_11449 | Not Available | Positive | 3994786 - 3995145 | 14226.4 |
| glycyl-trna synthetase | CLV58_11450 | Not Available | Negative | 3995285 - 3996793 | 57588.5 |
| rna polymerase sigma factor (sigma-70 family) | CLV58_11451 | Not Available | Positive | 3997048 - 3997626 | 22169.9 |
| hypothetical protein | CLV58_11452 | Not Available | Positive | 3997672 - 3998046 | 14286.5 |
| 2-polyprenyl-6-hydroxyphenyl methylase/3-demethylubiquinone-9 3-methyltransferase | CLV58_11453 | Not Available | Negative | 3998054 - 3998608 | 20763.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


