Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzae |
| Strain | DSM 28354 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1510969 bp
Thymine Count
1503814 bp
Guanine Count
1776646 bp
Cytosine Count
1778552 bp
Genome Length
6569981 bp
Protein-coding Genes
5670 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tfp pilus assembly protein pilf | CLV58_11434 | Not Available | Negative | 3973676 - 3975076 | 53797.9 |
| nucleoside-diphosphate-sugar epimerase | CLV58_11435 | Not Available | Negative | 3975192 - 3976229 | 38651.6 |
| methionyl-trna synthetase | CLV58_11436 | Not Available | Positive | 3976700 - 3978751 | 77282.0 |
| kup system potassium uptake protein | CLV58_11437 | Not Available | Positive | 3979138 - 3981108 | 73956.2 |
| cdp-paratose 2-epimerase | CLV58_11438 | Not Available | Positive | 3981161 - 3982222 | 39032.8 |
| hypothetical protein | CLV58_11439 | Not Available | Negative | 3982310 - 3983080 | 27473.7 |
| heme exporter protein b | CLV58_11440 | Not Available | Positive | 3983142 - 3983816 | 24978.4 |
| heme exporter protein c | CLV58_11441 | Not Available | Positive | 3983896 - 3984555 | 24836.8 |
| ccmd family protein | CLV58_11442 | Not Available | Positive | 3984611 - 3984877 | 9783.2 |
| cytochrome c-type biogenesis protein ccme | CLV58_11443 | Not Available | Positive | 3984922 - 3985362 | 16109.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


