Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzae |
| Strain | DSM 28354 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1510969 bp
Thymine Count
1503814 bp
Guanine Count
1776646 bp
Cytosine Count
1778552 bp
Genome Length
6569981 bp
Protein-coding Genes
5670 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aconitase | CLV58_111160 | Not Available | Negative | 3516390 - 3518663 | 81190.3 |
| chrd domain-containing protein | CLV58_111161 | Not Available | Positive | 3518934 - 3519395 | 16403.3 |
| 4-deoxy-l-threo-5-hexulose uronate isomerase | CLV58_111162 | Not Available | Positive | 3519600 - 3520430 | 30811.6 |
| glycosyl hydrolase family 88 | CLV58_111163 | Not Available | Positive | 3520490 - 3521668 | 44119.0 |
| dna topoisomerase i | CLV58_111164 | Not Available | Positive | 3522089 - 3524791 | 99700.3 |
| nad-dependent deacetylase | CLV58_111165 | Not Available | Positive | 3524970 - 3525692 | 26588.7 |
| endonuclease-3 | CLV58_111166 | Not Available | Positive | 3525753 - 3526472 | 27347.0 |
| putative flap endonuclease-1-like 5' dna nuclease | CLV58_111167 | Not Available | Negative | 3526578 - 3527318 | 26519.7 |
| putative flap endonuclease-1-like 5' dna nuclease | CLV58_111168 | Not Available | Negative | 3527351 - 3527848 | 18791.6 |
| oop family ompa-ompf porin | CLV58_111169 | Not Available | Negative | 3527860 - 3528882 | 36833.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


