Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzae |
| Strain | DSM 28354 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1510969 bp
Thymine Count
1503814 bp
Guanine Count
1776646 bp
Cytosine Count
1778552 bp
Genome Length
6569981 bp
Protein-coding Genes
5670 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin-guanine dinucleotide biosynthesis protein a | CLV58_107119 | Not Available | Positive | 2434828 - 2435451 | 22565.2 |
| hypothetical protein | CLV58_107120 | Not Available | Positive | 2435499 - 2436122 | 22333.0 |
| trna(arg) a34 adenosine deaminase tada | CLV58_107121 | Not Available | Positive | 2436133 - 2436618 | 17951.2 |
| 8-amino-3,8-dideoxy-alpha-d-manno-octulosonate transaminase | CLV58_107122 | Not Available | Positive | 2436720 - 2437916 | 43048.3 |
| uncharacterized protein duf4160 | CLV58_107123 | Not Available | Positive | 2437918 - 2438208 | 11204.4 |
| uncharacterized protein duf2442 | CLV58_107124 | Not Available | Positive | 2438147 - 2438455 | 11429.6 |
| uncharacterized protein duf2281 | CLV58_107125 | Not Available | Positive | 2438471 - 2438671 | 7713.93 |
| 3-deoxy-alpha-d-manno-octulosonate 8-oxidase | CLV58_107126 | Not Available | Positive | 2438781 - 2439866 | 40469.4 |
| 2-dehydro-3-deoxyphosphooctonate aldolase (kdo 8-p synthase) | CLV58_107127 | Not Available | Positive | 2439936 - 2440787 | 31427.0 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase) | CLV58_107128 | Not Available | Positive | 2440809 - 2441645 | 31424.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


