Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzae |
| Strain | DSM 28354 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1510969 bp
Thymine Count
1503814 bp
Guanine Count
1776646 bp
Cytosine Count
1778552 bp
Genome Length
6569981 bp
Protein-coding Genes
5670 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative nif3 family gtp cyclohydrolase 1 type 2 | CLV58_10561 | Not Available | Positive | 1691070 - 1691816 | 27611.7 |
| protein of unknown function (duf305) | CLV58_10562 | Not Available | Positive | 1691913 - 1692560 | 23787.6 |
| bacteriorhodopsin | CLV58_10563 | Not Available | Positive | 1692623 - 1693411 | 29013.9 |
| uncharacterized protein (tigr02284 family) | CLV58_10564 | Not Available | Positive | 1693515 - 1693961 | 16577.3 |
| aryl-alcohol dehydrogenase-like predicted oxidoreductase | CLV58_10565 | Not Available | Negative | 1694108 - 1694974 | 31871.9 |
| putative secreted protein (por secretion system target) | CLV58_10566 | Not Available | Positive | 1695241 - 1698036 | 102974.0 |
| prephenate dehydrogenase | CLV58_10567 | Not Available | Negative | 1698125 - 1698982 | 31074.8 |
| aspartate/methionine/tyrosine aminotransferase | CLV58_10568 | Not Available | Negative | 1698979 - 1700151 | 43094.7 |
| hypothetical protein | CLV58_10569 | Not Available | Positive | 1700441 - 1704772 | 149941.0 |
| hypothetical protein | CLV58_10570 | Not Available | Positive | 1704990 - 1705445 | 17042.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


