Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzae |
| Strain | DSM 28354 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1510969 bp
Thymine Count
1503814 bp
Guanine Count
1776646 bp
Cytosine Count
1778552 bp
Genome Length
6569981 bp
Protein-coding Genes
5670 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stearoyl-coa desaturase (delta-9 desaturase) | CLV58_10198 | Not Available | Positive | 122516 - 123265 | 29792.3 |
| putative transposase/invertase (tigr01784 family) | CLV58_10199 | Not Available | Positive | 123394 - 124239 | 32183.5 |
| histidine kinase | CLV58_101100 | Not Available | Positive | 124444 - 125490 | 40533.6 |
| lyttr family two component transcriptional regulator | CLV58_101101 | Not Available | Positive | 125490 - 126230 | 28322.4 |
| membrane fusion protein (multidrug efflux system) | CLV58_101102 | Not Available | Positive | 126363 - 127526 | 41576.0 |
| hae1 family hydrophobic/amphiphilic exporter-1 | CLV58_101103 | Not Available | Positive | 127589 - 130768 | 114253.0 |
| nodt family efflux transporter outer membrane factor (omf) lipoprotein | CLV58_101104 | Not Available | Positive | 130900 - 132327 | 52510.0 |
| hypothetical protein | CLV58_101105 | Not Available | Negative | 132490 - 132582 | 3615.35 |
| carboxymethylenebutenolidase | CLV58_101106 | Not Available | Positive | 132661 - 133548 | 32768.8 |
| acr3 family arsenite transporter | CLV58_101107 | Not Available | Negative | 133626 - 134693 | 39048.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


