Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzae |
| Strain | DSM 28354 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1510969 bp
Thymine Count
1503814 bp
Guanine Count
1776646 bp
Cytosine Count
1778552 bp
Genome Length
6569981 bp
Protein-coding Genes
5670 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secreted protein | CLV58_103265 | Not Available | Positive | 1213252 - 1214625 | 50584.2 |
| tonb-linked susc/raga family outer membrane protein | CLV58_103266 | Not Available | Positive | 1214868 - 1217846 | 108317.0 |
| putative outer membrane starch-binding protein | CLV58_103267 | Not Available | Positive | 1217860 - 1219311 | 53866.8 |
| uncharacterized protein duf5077 | CLV58_103268 | Not Available | Positive | 1219531 - 1220850 | 48359.6 |
| galactokinase | CLV58_103269 | Not Available | Positive | 1220884 - 1222005 | 40475.3 |
| hypothetical protein | CLV58_103270 | Not Available | Negative | 1222177 - 1222785 | 23376.7 |
| carbohydrate binding protein with cbm9 domain | CLV58_103271 | Not Available | Negative | 1223379 - 1225664 | 84987.0 |
| rna polymerase sigma-70 factor (ecf subfamily) | CLV58_103272 | Not Available | Positive | 1225997 - 1226578 | 22632.3 |
| fecr family protein | CLV58_103273 | Not Available | Positive | 1226669 - 1227697 | 38846.1 |
| tonb-linked susc/raga family outer membrane protein | CLV58_103274 | Not Available | Positive | 1227739 - 1231170 | 124818.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


