Acidiphilium sp. JA12-A1

Gram-negativeRodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Acetobacterales

Family

Acidocellaceae

Genus

Acidiphilium

Description

Acidiphilium sp. JA12-A1 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which contributes to its motility. This organism possesses a single replicon, indicating a simplified genomic structure that is typical for certain bacteria. The accession number for Acidiphilium sp. JA12-A1 is JFHO00000000.1, which allows for its identification and further study within genomic databases. As a member of the Acidiphilium genus, JA12-A1 is likely to thrive in acidic environments, which is a common ecological niche for this group. Acidiphilium species are known to play significant roles in biogeochemical cycles, particularly in environments with low pH, such as acidic soils or acid mine drainage. Their adaptation to such extreme conditions not only highlights their metabolic versatility but also their potential applications in bioremediation processes, where they may be utilized to mitigate environmental pollution in acidic settings. The presence of flagella suggests that Acidiphilium sp. JA12-A1 may exhibit motility, which could enhance its ability to colonize and exploit available resources in its habitat. Understanding the physiological and ecological roles of this bacterium can provide insights into its contributions to microbial communities in acidic ecosystems and its potential utility in environmental biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderAcetobacterales
FamilyAcidocellaceae
GenusAcidiphilium
SpeciesAcidiphilium sp. JA12-A1
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Acidiphilium sp. JA12-A1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature30
Temperature rangemesophilic
Habitatacid mine drainage; Acid mine drainage; iron-oxidizing mixed culture from a pilot plant for bioremediation of acid mine drainage
Biotic relationshipFree-living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNon-pathogenic

Genome Summary

Acidiphilium sp. JA12-A1 ACIDI_318c, whole genome shotgun

Gene Summary

Adenine Count

691589 bp

Thymine Count

694186 bp

Guanine Count

1412564 bp

Cytosine Count

1389926 bp

Genome Length

4188357 bp

Protein-coding Genes

3722 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
valine--trna ligase valsACIDI_96c00320Not AvailableNegative3511689 - 351436499305.5
hypothetical proteinACIDI_96c00330Not AvailableNegative3514523 - 351508019371.0
outer membrane efflux protein bepcACIDI_96c00340Not AvailableNegative3515077 - 351665755966.8
protein-l-isoaspartate(d-aspartate) o-methyltransferaseACIDI_96c00350Not AvailableNegative3516680 - 351734222886.5
Trna-cysNot AvailableNot AvailablePositive3517469 - 3517542Not Available
putative propionate--coa ligase prpeACIDI_96c00370Not AvailablePositive3517734 - 351962967676.3
hydroxyacylglutathione hydrolase globACIDI_96c00380Not AvailableNegative3519654 - 352038525322.0
methylase involved in ubiquinone/menaquinone biosynthesisACIDI_96c00390Not AvailablePositive3520419 - 352112625967.8
ltxxq motif family proteinACIDI_96c00400Not AvailableNegative3521136 - 352164218079.9
nifu domain-containing proteinACIDI_96c00410Not AvailablePositive3521847 - 352240419689.6

Displaying genes 3221 – 3230 of 3773 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.