Acidiphilium sp. JA12-A1

Gram-negativeRodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Acetobacterales

Family

Acidocellaceae

Genus

Acidiphilium

Description

Acidiphilium sp. JA12-A1 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which contributes to its motility. This organism possesses a single replicon, indicating a simplified genomic structure that is typical for certain bacteria. The accession number for Acidiphilium sp. JA12-A1 is JFHO00000000.1, which allows for its identification and further study within genomic databases. As a member of the Acidiphilium genus, JA12-A1 is likely to thrive in acidic environments, which is a common ecological niche for this group. Acidiphilium species are known to play significant roles in biogeochemical cycles, particularly in environments with low pH, such as acidic soils or acid mine drainage. Their adaptation to such extreme conditions not only highlights their metabolic versatility but also their potential applications in bioremediation processes, where they may be utilized to mitigate environmental pollution in acidic settings. The presence of flagella suggests that Acidiphilium sp. JA12-A1 may exhibit motility, which could enhance its ability to colonize and exploit available resources in its habitat. Understanding the physiological and ecological roles of this bacterium can provide insights into its contributions to microbial communities in acidic ecosystems and its potential utility in environmental biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderAcetobacterales
FamilyAcidocellaceae
GenusAcidiphilium
SpeciesAcidiphilium sp. JA12-A1
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Acidiphilium sp. JA12-A1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature30
Temperature rangemesophilic
Habitatacid mine drainage; Acid mine drainage; iron-oxidizing mixed culture from a pilot plant for bioremediation of acid mine drainage
Biotic relationshipFree-living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNon-pathogenic

Genome Summary

Acidiphilium sp. JA12-A1 ACIDI_318c, whole genome shotgun

Gene Summary

Adenine Count

691589 bp

Thymine Count

694186 bp

Guanine Count

1412564 bp

Cytosine Count

1389926 bp

Genome Length

4188357 bp

Protein-coding Genes

3722 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative nad-dependent epimerase/dehydrataseACIDI_44c01230Not AvailableNegative1924786 - 192571831481.2
polyhydroxyalkonate synthesis repressor, pharACIDI_44c01240Not AvailableNegative1925744 - 192633721953.4
putative permeaseACIDI_44c01250Not AvailableNegative1926447 - 192721726089.4
poly-beta-hydroxybutyrate polymerase phbcACIDI_44c01260Not AvailablePositive1927522 - 192869741645.4
acetyl-coa acetyltransferase phbaACIDI_44c01270Not AvailablePositive1928754 - 192992639937.8
succinyl-coa:3-ketoacid coenzyme a transferase subunit aACIDI_44c01280Not AvailablePositive1929951 - 193065225230.5
succinyl-coa:3-ketoacid coenzyme a transferase subunit bACIDI_44c01290Not AvailablePositive1930663 - 193134324246.3
4-aminobutyrate aminotransferase puueACIDI_44c01300Not AvailablePositive1931340 - 193262045252.9
hypothetical proteinACIDI_44c01310Not AvailableNegative1932627 - 193466072230.2
hypothetical protein upf0102ACIDI_44c01320Not AvailableNegative1934714 - 193499210091.2

Displaying genes 1751 – 1760 of 3773 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.