Acidiphilium sp. JA12-A1

Gram-negativeRodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Acetobacterales

Family

Acidocellaceae

Genus

Acidiphilium

Description

Acidiphilium sp. JA12-A1 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which contributes to its motility. This organism possesses a single replicon, indicating a simplified genomic structure that is typical for certain bacteria. The accession number for Acidiphilium sp. JA12-A1 is JFHO00000000.1, which allows for its identification and further study within genomic databases. As a member of the Acidiphilium genus, JA12-A1 is likely to thrive in acidic environments, which is a common ecological niche for this group. Acidiphilium species are known to play significant roles in biogeochemical cycles, particularly in environments with low pH, such as acidic soils or acid mine drainage. Their adaptation to such extreme conditions not only highlights their metabolic versatility but also their potential applications in bioremediation processes, where they may be utilized to mitigate environmental pollution in acidic settings. The presence of flagella suggests that Acidiphilium sp. JA12-A1 may exhibit motility, which could enhance its ability to colonize and exploit available resources in its habitat. Understanding the physiological and ecological roles of this bacterium can provide insights into its contributions to microbial communities in acidic ecosystems and its potential utility in environmental biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderAcetobacterales
FamilyAcidocellaceae
GenusAcidiphilium
SpeciesAcidiphilium sp. JA12-A1
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Acidiphilium sp. JA12-A1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature30
Temperature rangemesophilic
Habitatacid mine drainage; Acid mine drainage; iron-oxidizing mixed culture from a pilot plant for bioremediation of acid mine drainage
Biotic relationshipFree-living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNon-pathogenic

Genome Summary

Acidiphilium sp. JA12-A1 ACIDI_318c, whole genome shotgun

Gene Summary

Adenine Count

691589 bp

Thymine Count

694186 bp

Guanine Count

1412564 bp

Cytosine Count

1389926 bp

Genome Length

4188357 bp

Protein-coding Genes

3722 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribose transport system permease protein rbscACIDI_31c00200Not AvailablePositive1282803 - 128381334319.0
histone family protein dna-binding proteinACIDI_31c00210Not AvailablePositive1283945 - 12842149606.87
gdp-6-deoxy-d-mannose reductase rmdACIDI_31c00220Not AvailableNegative1284321 - 128521731791.1
gdp-mannose 4,6-dehydratase gmdACIDI_31c00230Not AvailableNegative1285332 - 128631536693.1
aldehyde oxidase and xanthine dehydrogenase, molybdopterin bindingACIDI_31c00240Not AvailableNegative1286394 - 128864078624.3
molybdopterin dehydrogenase, fad-bindingACIDI_31c00250Not AvailableNegative1288633 - 128967635717.9
2fe-2s iron-sulfur cluster binding domain-containing proteinACIDI_31c00260Not AvailableNegative1289673 - 129017017545.1
tetr family transcriptional regulatorACIDI_31c00270Not AvailablePositive1290311 - 129091621614.1
had family hydrolaseACIDI_31c00280Not AvailablePositive1291049 - 129172624700.7
alpha/beta hydrolase fold proteinACIDI_31c00290Not AvailablePositive1291772 - 129268033025.4

Displaying genes 1191 – 1200 of 3773 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.