Paenibacillus yonginensis str. DCY84

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus yonginensis str. DCY84 is characterized by having a single replicon, which is essential for its genetic stability and replication. The strain’s genomic information is cataloged under the accession NZ_CP014167.1, providing a reference point for further studies and comparisons within the genus Paenibacillus. Paenibacillus species are known for their diverse metabolic capabilities and roles in various ecological niches. While specific traits for strain DCY84 are not detailed here, the genus itself is often associated with beneficial functions in soil health and plant growth promotion. This includes nitrogen fixation, organic matter decomposition, and even potential biocontrol applications against plant pathogens. Given its classification and genetic profile, Paenibacillus yonginensis str. DCY84 could contribute positively to agricultural ecosystems, possibly enhancing soil fertility and plant resilience. Further research into this strain could elucidate its specific metabolic pathways and ecological interactions, shedding light on its potential applications in sustainable agriculture and environmental management. The single replicon feature may also facilitate the study of its genetic traits, making it a candidate for biotechnological innovations.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus yonginensis
StrainDCY84

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenibacillus yonginensis strain DCY84 chromosome, complete

Gene Summary

Adenine Count

1217037 bp

Thymine Count

1225335 bp

Guanine Count

1269403 bp

Cytosine Count

1274126 bp

Genome Length

4985901 bp

Protein-coding Genes

4462 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
arsenate reductase family proteinAWM70_RS02845Not AvailablePositive637280 - 63763913291.0
5'-3' exonuclease h3th domain-containing proteinAWM70_RS02850Not AvailablePositive637707 - 63859433129.8
phosphodiester glycosidase family proteinAWM70_RS02855Not AvailablePositive638591 - 63970337987.0
duf3055 domain-containing proteinAWM70_RS02860Not AvailableNegative639727 - 64002911176.0
hrdc domain-containing proteinAWM70_RS02865Not AvailablePositive640261 - 64128338971.1
magnesium/cobalt transporter coraAWM70_RS02870Not AvailableNegative641399 - 64233436513.3
homoserine o-succinyltransferaseAWM70_RS02875Not AvailablePositive643038 - 64397335740.1
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeAWM70_RS02880Not AvailablePositive643988 - 64520244308.7
plp-dependent aspartate aminotransferase family proteinAWM70_RS02885Not AvailablePositive645205 - 64639242907.2
cyclic dehypoxanthinyl futalosine synthaseAWM70_RS02890Not AvailablePositive646592 - 64772842982.5

Displaying genes 571 – 580 of 4462 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.