Paenibacillus yonginensis str. DCY84

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus yonginensis str. DCY84 is characterized by having a single replicon, which is essential for its genetic stability and replication. The strain’s genomic information is cataloged under the accession NZ_CP014167.1, providing a reference point for further studies and comparisons within the genus Paenibacillus. Paenibacillus species are known for their diverse metabolic capabilities and roles in various ecological niches. While specific traits for strain DCY84 are not detailed here, the genus itself is often associated with beneficial functions in soil health and plant growth promotion. This includes nitrogen fixation, organic matter decomposition, and even potential biocontrol applications against plant pathogens. Given its classification and genetic profile, Paenibacillus yonginensis str. DCY84 could contribute positively to agricultural ecosystems, possibly enhancing soil fertility and plant resilience. Further research into this strain could elucidate its specific metabolic pathways and ecological interactions, shedding light on its potential applications in sustainable agriculture and environmental management. The single replicon feature may also facilitate the study of its genetic traits, making it a candidate for biotechnological innovations.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus yonginensis
StrainDCY84

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenibacillus yonginensis strain DCY84 chromosome, complete

Gene Summary

Adenine Count

1217037 bp

Thymine Count

1225335 bp

Guanine Count

1269403 bp

Cytosine Count

1274126 bp

Genome Length

4985901 bp

Protein-coding Genes

4462 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
helix-turn-helix domain-containing proteinAWM70_RS19700Not AvailableNegative4315527 - 431587413213.2
sdr family nad(p)-dependent oxidoreductaseAWM70_RS19705Not AvailableNegative4316035 - 431678126659.1
dinb family proteinAWM70_RS19710Not AvailablePositive4317390 - 431789018650.3
ger(x)c family spore germination proteinAWM70_RS19715Not AvailableNegative4317971 - 431917044594.5
gerab/arcd/proy family transporterAWM70_RS19720Not AvailableNegative4319163 - 432026640517.7
spore germination proteinAWM70_RS19725Not AvailableNegative4320290 - 432191860183.7
malate dehydrogenase (quinone)AWM70_RS19730Not AvailablePositive4322267 - 432375754806.4
glycoside hydrolase family 3 proteinAWM70_RS19735Not AvailablePositive4323957 - 4326878106102.0
smi1/knr4 family proteinAWM70_RS19740Not AvailablePositive4327053 - 432810538255.7
carboxynorspermidine decarboxylaseAWM70_RS19745Not AvailableNegative4328294 - 432942141564.9

Displaying genes 3901 – 3910 of 4462 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.