Paenibacillus yonginensis str. DCY84

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus yonginensis str. DCY84 is characterized by having a single replicon, which is essential for its genetic stability and replication. The strain’s genomic information is cataloged under the accession NZ_CP014167.1, providing a reference point for further studies and comparisons within the genus Paenibacillus. Paenibacillus species are known for their diverse metabolic capabilities and roles in various ecological niches. While specific traits for strain DCY84 are not detailed here, the genus itself is often associated with beneficial functions in soil health and plant growth promotion. This includes nitrogen fixation, organic matter decomposition, and even potential biocontrol applications against plant pathogens. Given its classification and genetic profile, Paenibacillus yonginensis str. DCY84 could contribute positively to agricultural ecosystems, possibly enhancing soil fertility and plant resilience. Further research into this strain could elucidate its specific metabolic pathways and ecological interactions, shedding light on its potential applications in sustainable agriculture and environmental management. The single replicon feature may also facilitate the study of its genetic traits, making it a candidate for biotechnological innovations.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus yonginensis
StrainDCY84

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenibacillus yonginensis strain DCY84 chromosome, complete

Gene Summary

Adenine Count

1217037 bp

Thymine Count

1225335 bp

Guanine Count

1269403 bp

Cytosine Count

1274126 bp

Genome Length

4985901 bp

Protein-coding Genes

4462 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
reverse transcriptase domain-containing proteinAWM70_RS23640Not AvailableNegative2910830 - 29110457796.38
phosphoribosylglycinamide formyltransferaseAWM70_RS22845Not AvailablePositive2912215 - 291359851841.7
cysteine metabolism transcriptional regulator cymrAWM70_RS13210Not AvailableNegative2913714 - 291413315472.4
trna 2-thiouridine(34) synthase mnmaAWM70_RS13215Not AvailablePositive2914395 - 291553442296.0
glycoside hydrolase family 3 c-terminal domain-containing proteinAWM70_RS13220Not AvailableNegative2915845 - 291849997997.2
glycoside hydrolase family 38 c-terminal domain-containing proteinAWM70_RS13225Not AvailableNegative2918612 - 2921722118100.0
substrate-binding domain-containing proteinAWM70_RS13230Not AvailablePositive2921999 - 292311141293.4
extracellular solute-binding proteinAWM70_RS13235Not AvailableNegative2923260 - 292498462754.5
carbohydrate abc transporter permeaseAWM70_RS13240Not AvailableNegative2925041 - 292595834336.6
sugar abc transporter permeaseAWM70_RS13245Not AvailableNegative2925965 - 292683732886.7

Displaying genes 2661 – 2670 of 4462 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.