Pseudoalteromonas sp. SCSIO_11900

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas sp. SCSIO_11900 is characterized as a rod-shaped bacterium and possesses a single replicon. This specific strain is cataloged under the accession number JEMJ00000000.1, indicating its genetic sequence has been made available for scientific study. The genus Pseudoalteromonas is known for its ecological roles in marine environments, often associated with the surfaces of various marine organisms and sediments. Members of this genus are recognized for their potential in producing bioactive compounds, which can have applications in medicine and biotechnology. The unique adaptations of Pseudoalteromonas sp. SCSIO_11900 could contribute to the understanding of microbial diversity in marine ecosystems and the interactions between microorganisms and their environments. In summary, the characteristics of Pseudoalteromonas sp. SCSIO_11900, specifically its rod shape, single replicon, and genetic accessibility, highlight its significance within the broader context of marine microbiology. This strain may offer insights into the functional capabilities of marine bacteria and their potential applications in ecological and biotechnological research.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas sp. SCSIO_11900
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas sp. SCSIO_11900 Scaffold10_1, whole genome

Gene Summary

Adenine Count

1111429 bp

Thymine Count

1106438 bp

Guanine Count

757329 bp

Cytosine Count

749507 bp

Genome Length

3724703 bp

Protein-coding Genes

3170 genes

Non-Coding Genes

116 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
potassium transporter peripheral membrane componentBG00_07165Not AvailableNegative917032 - 91840850066.6
16s rrna methyltransferaseBG00_07170Not AvailableNegative918484 - 91977948315.5
methionyl-trna formyltransferaseBG00_07175Not AvailableNegative919772 - 92072534431.1
peptide deformylaseBG00_07180Not AvailableNegative920757 - 92126319122.1
peptidoglycan-binding proteinBG00_07185Not AvailablePositive921383 - 92250441877.6
dna protecting protein dpraBG00_07190Not AvailablePositive922533 - 92362439422.7
hypothetical proteinBG00_07195Not AvailablePositive923626 - 92409918080.4
cytochrome c551BG00_07200Not AvailablePositive924211 - 92478621411.6
trna(ann) t(6)a37 threonylcarbamoyladenosine modification proteinBG00_07205Not AvailablePositive924810 - 92537320299.2
coproporphyrinogen iii oxidaseBG00_07210Not AvailablePositive925376 - 92629334920.0

Displaying genes 831 – 840 of 3286 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.