Pseudoalteromonas sp. SCSIO_11900

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas sp. SCSIO_11900 is characterized as a rod-shaped bacterium and possesses a single replicon. This specific strain is cataloged under the accession number JEMJ00000000.1, indicating its genetic sequence has been made available for scientific study. The genus Pseudoalteromonas is known for its ecological roles in marine environments, often associated with the surfaces of various marine organisms and sediments. Members of this genus are recognized for their potential in producing bioactive compounds, which can have applications in medicine and biotechnology. The unique adaptations of Pseudoalteromonas sp. SCSIO_11900 could contribute to the understanding of microbial diversity in marine ecosystems and the interactions between microorganisms and their environments. In summary, the characteristics of Pseudoalteromonas sp. SCSIO_11900, specifically its rod shape, single replicon, and genetic accessibility, highlight its significance within the broader context of marine microbiology. This strain may offer insights into the functional capabilities of marine bacteria and their potential applications in ecological and biotechnological research.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas sp. SCSIO_11900
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas sp. SCSIO_11900 Scaffold10_1, whole genome

Gene Summary

Adenine Count

1111429 bp

Thymine Count

1106438 bp

Guanine Count

757329 bp

Cytosine Count

749507 bp

Genome Length

3724703 bp

Protein-coding Genes

3170 genes

Non-Coding Genes

116 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
xaa-pro aminopeptidaseBG00_01030Not AvailableNegative213898 - 21498339913.6
proline racemaseBG00_01035Not AvailableNegative214980 - 21602638646.3
23s ribosomal rnaNot AvailableNot AvailablePositive216731 - 219641Not Available
tonb-dependent receptorBG00_01040Not AvailableNegative216192 - 219185109117.0
5s ribosomal rnaNot AvailableNot AvailablePositive219755 - 219869Not Available
gntr family transcriptional regulatorBG00_01045Not AvailableNegative219500 - 22017124931.0
aldehyde dehydrogenaseBG00_01050Not AvailableNegative220292 - 22178853421.8
hydroxyproline-2-epimeraseBG00_01055Not AvailableNegative221802 - 22280336176.2
hypothetical proteinBG00_01060Not AvailableNegative222807 - 2230227776.26
amino acid dehydrogenaseBG00_01065Not AvailablePositive223291 - 22453845713.8

Displaying genes 211 – 220 of 3286 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.