Vibrio sp. JCM 19053

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. JCM 19053 is characterized by a single replicon, indicating a streamlined genomic structure. The genomic data for this organism is available under the accession number BAXK00000000.1. As a member of the Vibrio genus, it is important to consider that species within this group are often associated with aquatic environments, where they play significant roles in nutrient cycling and can be involved in the degradation of organic matter. This trait suggests that Vibrio sp. JCM 19053 may contribute to ecological processes in its habitat, potentially impacting water quality and the health of aquatic ecosystems. In summary, Vibrio sp. JCM 19053, with its single replicon and documented genomic sequence, exemplifies the traits typical of the Vibrio genus, which is crucial for understanding its ecological role and potential applications in microbiology and environmental science.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. JCM 19053
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. JCM 19053
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. JCM 19053 DNA, contig: JCM19053.contig00106, whole

Gene Summary

Adenine Count

1433332 bp

Thymine Count

1439478 bp

Guanine Count

1164581 bp

Cytosine Count

1131291 bp

Genome Length

5168682 bp

Protein-coding Genes

4752 genes

Non-Coding Genes

109 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
t1ss associated transglutaminase-like cysteine proteinase lappJCM19053_2107Not AvailableNegative2395278 - 239596226110.3
type i secretion system, membrane fusion protein lapcJCM19053_2108Not AvailableNegative2396077 - 239746952312.6
putative two-component response regulatorJCM19053_2109Not AvailableNegative2397643 - 239886646766.3
signal transduction histidine kinaseJCM19053_2110Not AvailableNegative2398859 - 240073370155.9
pyridoxamine 5'-phosphate oxidaseJCM19053_2111Not AvailablePositive2400849 - 240148424134.8
transcriptional regulator, luxr familyJCM19053_2112Not AvailableNegative2401558 - 240228927575.9
transcriptional regulator, arac familyJCM19053_2113Not AvailablePositive2403250 - 240406330606.8
proline dehydrogenaseJCM19053_2114Not AvailablePositive2404470 - 2407599115144.0
delta 1-pyrroline-5-carboxylate dehydrogenase domain proteinJCM19053_2115Not AvailablePositive2407611 - 240831825455.1
proline/sodium symporter putpJCM19053_2116Not AvailablePositive2408456 - 240994753063.1

Displaying genes 2271 – 2280 of 4861 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.