Vibrio sp. JCM 19053

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. JCM 19053 is characterized by a single replicon, indicating a streamlined genomic structure. The genomic data for this organism is available under the accession number BAXK00000000.1. As a member of the Vibrio genus, it is important to consider that species within this group are often associated with aquatic environments, where they play significant roles in nutrient cycling and can be involved in the degradation of organic matter. This trait suggests that Vibrio sp. JCM 19053 may contribute to ecological processes in its habitat, potentially impacting water quality and the health of aquatic ecosystems. In summary, Vibrio sp. JCM 19053, with its single replicon and documented genomic sequence, exemplifies the traits typical of the Vibrio genus, which is crucial for understanding its ecological role and potential applications in microbiology and environmental science.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. JCM 19053
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. JCM 19053
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. JCM 19053 DNA, contig: JCM19053.contig00106, whole

Gene Summary

Adenine Count

1433332 bp

Thymine Count

1439478 bp

Guanine Count

1164581 bp

Cytosine Count

1131291 bp

Genome Length

5168682 bp

Protein-coding Genes

4752 genes

Non-Coding Genes

109 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-binding response regulator, arac familyJCM19053_713Not AvailableNegative1908075 - 1910496126456.0
zinc abc transporter, periplasmic-binding protein znuaJCM19053_714Not AvailableNegative1911656 - 191254232883.0
zinc abc transporter, atp-binding protein znucJCM19053_715Not AvailablePositive1912621 - 191340829196.3
zinc abc transporter, inner membrane permease protein znubJCM19053_716Not AvailablePositive1913401 - 191418627564.0
succinyl-coa ligaseJCM19053_717Not AvailableNegative1914306 - 191517830013.2
succinyl-coa ligaseJCM19053_718Not AvailableNegative1915178 - 191634441530.9
dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complexJCM19053_719Not AvailableNegative1916557 - 191776443771.8
2-oxoglutarate dehydrogenase e1 componentJCM19053_720Not AvailableNegative1917779 - 1919729106071.0
succinate dehydrogenase iron-sulfur proteinJCM19053_721Not AvailableNegative1920787 - 192149626328.8
succinate dehydrogenase flavoprotein subunitJCM19053_722Not AvailableNegative1921512 - 192327864229.3

Displaying genes 1831 – 1840 of 4861 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.