Vibrio sp. JCM 19053

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. JCM 19053 is characterized by a single replicon, indicating a streamlined genomic structure. The genomic data for this organism is available under the accession number BAXK00000000.1. As a member of the Vibrio genus, it is important to consider that species within this group are often associated with aquatic environments, where they play significant roles in nutrient cycling and can be involved in the degradation of organic matter. This trait suggests that Vibrio sp. JCM 19053 may contribute to ecological processes in its habitat, potentially impacting water quality and the health of aquatic ecosystems. In summary, Vibrio sp. JCM 19053, with its single replicon and documented genomic sequence, exemplifies the traits typical of the Vibrio genus, which is crucial for understanding its ecological role and potential applications in microbiology and environmental science.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. JCM 19053
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. JCM 19053
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. JCM 19053 DNA, contig: JCM19053.contig00106, whole

Gene Summary

Adenine Count

1433332 bp

Thymine Count

1439478 bp

Guanine Count

1164581 bp

Cytosine Count

1131291 bp

Genome Length

5168682 bp

Protein-coding Genes

4752 genes

Non-Coding Genes

109 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcription accessory proteinJCM19053_2822Not AvailablePositive1540226 - 154254885316.7
putative atp-dependent lon proteaseJCM19053_2823Not AvailableNegative1542652 - 154311417426.7
biotin synthesis protein biohJCM19053_2824Not AvailableNegative1543239 - 154402428887.7
hypothetical proteinJCM19053_2825Not AvailableNegative1544161 - 15443226062.5
competence protein f homolog, phosphoribosyltransferase domainJCM19053_2826Not AvailablePositive1544274 - 154481620522.6
nfua fe-s protein maturationJCM19053_2827Not AvailablePositive1544914 - 154549721026.6
adp compounds hydrolase nudeJCM19053_2828Not AvailablePositive1545674 - 154624221301.7
3'(2'),5'-bisphosphate nucleotidaseJCM19053_2829Not AvailablePositive1546287 - 154711430802.4
general secretion pathway protein nJCM19053_2830Not AvailableNegative1547407 - 154810625302.9
general secretion pathway protein mJCM19053_2831Not AvailableNegative1548169 - 154866018734.7

Displaying genes 1471 – 1480 of 4861 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.