Geomicrobium sp. JCM 19039

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Genus

Geomicrobium

Description

Geomicrobium sp. JCM 19039 is a unique microbial organism characterized by its singular replicon, indicating a streamlined genetic structure that may contribute to its adaptability and ecological niche. The strain is cataloged under accession number BAXB00000000.1, which serves as a reference for genetic and taxonomic studies. Given its classification within the genus Geomicrobium, this organism is likely to be involved in biogeochemical processes in its natural environment. Members of the Geomicrobium genus are known for their roles in the cycling of various elements, which can have implications for nutrient availability and ecosystem health. The simplification of having a single replicon suggests a potential efficiency in replication and resource utilization, traits that can be advantageous in competitive environments. In summary, Geomicrobium sp. JCM 19039, with its single replicon and established genetic reference, represents a distinct entity within its genus. Its ecological role is likely tied to microbial processes that influence ecosystem dynamics, particularly in environments where such microorganisms play a crucial part in biogeochemical cycles. Understanding this strain could enhance our knowledge of microbial ecology and the functional contributions of Geomicrobium species in various habitats.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geomicrobium sp. JCM 19039 DNA, contig: JCM19039.contig00057,

Gene Summary

Adenine Count

1186682 bp

Thymine Count

1140236 bp

Guanine Count

971504 bp

Cytosine Count

871945 bp

Genome Length

4170367 bp

Protein-coding Genes

4283 genes

Non-Coding Genes

133 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
autoinducer 2 (ai-2) abc transport system, membrane channel protein lsrdJCM19039_4100Not AvailableNegative3646970 - 364771626479.1
autoinducer 2 (ai-2) abc transport system, membrane channel protein lsrdJCM19039_4101Not AvailableNegative3647713 - 36479649192.89
autoinducer 2 (ai-2) abc transport system, membrane channel protein lsrcJCM19039_4102Not AvailableNegative3647961 - 364897135856.5
autoinducer 2 (ai-2) abc transport system, fused ai2 transporter subunits and atp-binding componentJCM19039_4103Not AvailableNegative3648968 - 36492169095.81
autoinducer 2 (ai-2) abc transport system, fused ai2 transporter subunits and atp-binding componentJCM19039_4104Not AvailableNegative3649219 - 365045746200.3
pyruvate dehydrogenase e1 component alpha subunitJCM19039_4106Not AvailablePositive3652346 - 365342839886.1
pyruvate dehydrogenase e1 component beta subunitJCM19039_4107Not AvailablePositive3653431 - 365440835390.1
dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complexJCM19039_4108Not AvailablePositive3654439 - 365572246646.5
dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complexJCM19039_4109Not AvailablePositive3655726 - 365713549542.3
hypothetical proteinJCM19039_4110Not AvailableNegative3657243 - 365764415110.6

Displaying genes 3841 – 3850 of 4416 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.