Geomicrobium sp. JCM 19038

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Genus

Geomicrobium

Description

Geomicrobium sp. JCM 19038 is a notable bacterium characterized by a single replicon, indicating a streamlined genomic organization. Its genomic data can be accessed through the accession number BAXA00000000.1. This organism is part of the genus Geomicrobium, which is known for its potential roles in biogeochemical cycling and interactions with the environment. The presence of only one replicon suggests that Geomicrobium sp. JCM 19038 may possess a simpler genetic framework compared to other bacteria that have multiple replicons. This can imply a more efficient replication process, which may contribute to its adaptability and survival in various ecological niches. The ecological significance of Geomicrobium species often revolves around their involvement in mineral transformations and nutrient cycling, particularly in marine and sedimentary environments. In summary, Geomicrobium sp. JCM 19038, with its single replicon and specific genomic information, represents an interesting subject for further study in microbial ecology. Understanding its genetic traits could provide insights into its ecological roles, particularly in biogeochemical processes, and enhance our knowledge of microbial diversity and function in various environments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geomicrobium sp. JCM 19038


Gene Summary

Adenine Count

1158452 bp

Thymine Count

1096318 bp

Guanine Count

869156 bp

Cytosine Count

748694 bp

Genome Length

3872620 bp

Protein-coding Genes

4017 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cell wall lytic activityJCM19038_782Not AvailablePositive709003 - 70935312279.2
trap-type c4-dicarboxylate transport system, small permease componentJCM19038_783Not AvailablePositive710357 - 7105818012.86
trap-type c4-dicarboxylate transport system, large permease componentJCM19038_784Not AvailablePositive710578 - 71185044030.1
d-3-phosphoglycerate dehydrogenaseJCM19038_785Not AvailablePositive711965 - 71295736622.7
iron-sulfur cluster binding proteinJCM19038_786Not AvailablePositive713158 - 71440844801.7
dihydroxy-acid dehydrataseJCM19038_787Not AvailablePositive714431 - 71663682083.8
hypothetical proteinJCM19038_788Not AvailablePositive716637 - 71757234222.5
transcriptional regulator, iclr familyJCM19038_789Not AvailablePositive717652 - 71841028503.1
fumarylacetoacetate hydrolase family proteinJCM19038_790Not AvailablePositive718450 - 71936434436.1
aldehyde dehydrogenaseJCM19038_791Not AvailablePositive719455 - 72090652086.3

Displaying genes 861 – 870 of 4141 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.