Geomicrobium sp. JCM 19038

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Genus

Geomicrobium

Description

Geomicrobium sp. JCM 19038 is a notable bacterium characterized by a single replicon, indicating a streamlined genomic organization. Its genomic data can be accessed through the accession number BAXA00000000.1. This organism is part of the genus Geomicrobium, which is known for its potential roles in biogeochemical cycling and interactions with the environment. The presence of only one replicon suggests that Geomicrobium sp. JCM 19038 may possess a simpler genetic framework compared to other bacteria that have multiple replicons. This can imply a more efficient replication process, which may contribute to its adaptability and survival in various ecological niches. The ecological significance of Geomicrobium species often revolves around their involvement in mineral transformations and nutrient cycling, particularly in marine and sedimentary environments. In summary, Geomicrobium sp. JCM 19038, with its single replicon and specific genomic information, represents an interesting subject for further study in microbial ecology. Understanding its genetic traits could provide insights into its ecological roles, particularly in biogeochemical processes, and enhance our knowledge of microbial diversity and function in various environments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geomicrobium sp. JCM 19038


Gene Summary

Adenine Count

1158452 bp

Thymine Count

1096318 bp

Guanine Count

869156 bp

Cytosine Count

748694 bp

Genome Length

3872620 bp

Protein-coding Genes

4017 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Terminase large subunitJCM19038_2801Not AvailablePositive2566073 - 256750055011.2
Portal proteinJCM19038_2802Not AvailablePositive2567506 - 256872646637.5
hypothetical proteinJCM19038_2803Not AvailablePositive2568786 - 256959231535.5
Clp proteaseJCM19038_2804Not AvailablePositive2569632 - 257043829747.6
Major capsid proteinJCM19038_2805Not AvailablePositive2570431 - 257165446021.5
Gp6-like head-tail connector proteinJCM19038_2807Not AvailablePositive2571777 - 257208211225.5
hypothetical proteinJCM19038_2808Not AvailablePositive2572033 - 257232610970.1
Head-tail adaptor proteinJCM19038_2809Not AvailablePositive2572323 - 257262212026.6
Putative head-tail joining proteinJCM19038_2810Not AvailablePositive2572626 - 257298813487.2
hypothetical proteinJCM19038_2811Not AvailablePositive2572985 - 257333513994.1

Displaying genes 31 – 40 of 4141 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.